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A Generative Adversarial Network to Synthesize 3D Magnetohydrodynamic Distortions for Electrocardiogram Analyses Applied to Cardiac Magnetic Resonance Imaging

Recently, deep learning (DL) models have been increasingly adopted for automatic analyses of medical data, including electrocardiograms (ECGs). Large, available ECG datasets, generally of high quality, often lack specific distortions, which could be helpful for enhancing DL-based algorithms. Synthet...

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Autores principales: Mehri, Maroua, Calmon, Guillaume, Odille, Freddy, Oster, Julien, Lalande, Alain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10649946/
https://www.ncbi.nlm.nih.gov/pubmed/37960391
http://dx.doi.org/10.3390/s23218691
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author Mehri, Maroua
Calmon, Guillaume
Odille, Freddy
Oster, Julien
Lalande, Alain
author_facet Mehri, Maroua
Calmon, Guillaume
Odille, Freddy
Oster, Julien
Lalande, Alain
author_sort Mehri, Maroua
collection PubMed
description Recently, deep learning (DL) models have been increasingly adopted for automatic analyses of medical data, including electrocardiograms (ECGs). Large, available ECG datasets, generally of high quality, often lack specific distortions, which could be helpful for enhancing DL-based algorithms. Synthetic ECG datasets could overcome this limitation. A generative adversarial network (GAN) was used to synthesize realistic 3D magnetohydrodynamic (MHD) distortion templates, as observed during magnetic resonance imaging (MRI), and then added to available ECG recordings to produce an augmented dataset. Similarity metrics, as well as the accuracy of a DL-based R-peak detector trained with and without data augmentation, were used to evaluate the effectiveness of the synthesized data. Three-dimensional MHD distortions produced by the proposed GAN were similar to the measured ones used as input. The precision of a DL-based R-peak detector, tested on actual unseen data, was significantly enhanced by data augmentation; its recall was higher when trained with augmented data. Using synthesized MHD-distorted ECGs significantly improves the accuracy of a DL-based R-peak detector, with a good generalization capacity. This provides a simple and effective alternative to collecting new patient data. DL-based algorithms for ECG analyses can suffer from bias or gaps in training datasets. Using a GAN to synthesize new data, as well as metrics to evaluate its performance, can overcome the scarcity issue of data availability.
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spelling pubmed-106499462023-10-24 A Generative Adversarial Network to Synthesize 3D Magnetohydrodynamic Distortions for Electrocardiogram Analyses Applied to Cardiac Magnetic Resonance Imaging Mehri, Maroua Calmon, Guillaume Odille, Freddy Oster, Julien Lalande, Alain Sensors (Basel) Article Recently, deep learning (DL) models have been increasingly adopted for automatic analyses of medical data, including electrocardiograms (ECGs). Large, available ECG datasets, generally of high quality, often lack specific distortions, which could be helpful for enhancing DL-based algorithms. Synthetic ECG datasets could overcome this limitation. A generative adversarial network (GAN) was used to synthesize realistic 3D magnetohydrodynamic (MHD) distortion templates, as observed during magnetic resonance imaging (MRI), and then added to available ECG recordings to produce an augmented dataset. Similarity metrics, as well as the accuracy of a DL-based R-peak detector trained with and without data augmentation, were used to evaluate the effectiveness of the synthesized data. Three-dimensional MHD distortions produced by the proposed GAN were similar to the measured ones used as input. The precision of a DL-based R-peak detector, tested on actual unseen data, was significantly enhanced by data augmentation; its recall was higher when trained with augmented data. Using synthesized MHD-distorted ECGs significantly improves the accuracy of a DL-based R-peak detector, with a good generalization capacity. This provides a simple and effective alternative to collecting new patient data. DL-based algorithms for ECG analyses can suffer from bias or gaps in training datasets. Using a GAN to synthesize new data, as well as metrics to evaluate its performance, can overcome the scarcity issue of data availability. MDPI 2023-10-24 /pmc/articles/PMC10649946/ /pubmed/37960391 http://dx.doi.org/10.3390/s23218691 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mehri, Maroua
Calmon, Guillaume
Odille, Freddy
Oster, Julien
Lalande, Alain
A Generative Adversarial Network to Synthesize 3D Magnetohydrodynamic Distortions for Electrocardiogram Analyses Applied to Cardiac Magnetic Resonance Imaging
title A Generative Adversarial Network to Synthesize 3D Magnetohydrodynamic Distortions for Electrocardiogram Analyses Applied to Cardiac Magnetic Resonance Imaging
title_full A Generative Adversarial Network to Synthesize 3D Magnetohydrodynamic Distortions for Electrocardiogram Analyses Applied to Cardiac Magnetic Resonance Imaging
title_fullStr A Generative Adversarial Network to Synthesize 3D Magnetohydrodynamic Distortions for Electrocardiogram Analyses Applied to Cardiac Magnetic Resonance Imaging
title_full_unstemmed A Generative Adversarial Network to Synthesize 3D Magnetohydrodynamic Distortions for Electrocardiogram Analyses Applied to Cardiac Magnetic Resonance Imaging
title_short A Generative Adversarial Network to Synthesize 3D Magnetohydrodynamic Distortions for Electrocardiogram Analyses Applied to Cardiac Magnetic Resonance Imaging
title_sort generative adversarial network to synthesize 3d magnetohydrodynamic distortions for electrocardiogram analyses applied to cardiac magnetic resonance imaging
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10649946/
https://www.ncbi.nlm.nih.gov/pubmed/37960391
http://dx.doi.org/10.3390/s23218691
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