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Rapid Identification of High-Temperature Responsive Genes Using Large-Scale Yeast Functional Screening System in Potato

As the third largest global food crop, potato plays an important role in ensuring food security. However, it is particularly sensitive to high temperatures, which seriously inhibits its growth and development, thereby reducing yield and quality and severely limiting its planting area. Therefore, rap...

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Autores principales: Wang, Ke, Wen, Shiqi, Shang, Lina, Li, Yang, Li, Ziyan, Chen, Weixi, Li, Yong, Jian, Hongju, Lyu, Dianqiu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10650283/
https://www.ncbi.nlm.nih.gov/pubmed/37960068
http://dx.doi.org/10.3390/plants12213712
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author Wang, Ke
Wen, Shiqi
Shang, Lina
Li, Yang
Li, Ziyan
Chen, Weixi
Li, Yong
Jian, Hongju
Lyu, Dianqiu
author_facet Wang, Ke
Wen, Shiqi
Shang, Lina
Li, Yang
Li, Ziyan
Chen, Weixi
Li, Yong
Jian, Hongju
Lyu, Dianqiu
author_sort Wang, Ke
collection PubMed
description As the third largest global food crop, potato plays an important role in ensuring food security. However, it is particularly sensitive to high temperatures, which seriously inhibits its growth and development, thereby reducing yield and quality and severely limiting its planting area. Therefore, rapid, and high-throughput screening for high-temperature response genes is highly significant for analyzing potato high-temperature tolerance molecular mechanisms and cultivating new high-temperature-tolerant potato varieties. We screened genes that respond to high temperature by constructing a potato cDNA yeast library. After high-temperature treatment at 39 °C, the yeast library was subjected to high-throughput sequencing, and a total of 1931 heat resistance candidate genes were screened. Through GO and KEGG analysis, we found they were mainly enriched in “photosynthesis” and “response to stimuli” pathways. Subsequently, 12 randomly selected genes were validated under high temperature, drought, and salt stress using qRT-PCR. All genes were responsive to high temperature, and most were also induced by drought and salt stress. Among them, five genes ectopically expressed in yeast enhance yeast’s tolerance to high temperatures. We provide numerous candidate genes for potato response to high temperature stress, laying the foundation for subsequent analysis of the molecular mechanism of potato response to high temperature.
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spelling pubmed-106502832023-10-28 Rapid Identification of High-Temperature Responsive Genes Using Large-Scale Yeast Functional Screening System in Potato Wang, Ke Wen, Shiqi Shang, Lina Li, Yang Li, Ziyan Chen, Weixi Li, Yong Jian, Hongju Lyu, Dianqiu Plants (Basel) Article As the third largest global food crop, potato plays an important role in ensuring food security. However, it is particularly sensitive to high temperatures, which seriously inhibits its growth and development, thereby reducing yield and quality and severely limiting its planting area. Therefore, rapid, and high-throughput screening for high-temperature response genes is highly significant for analyzing potato high-temperature tolerance molecular mechanisms and cultivating new high-temperature-tolerant potato varieties. We screened genes that respond to high temperature by constructing a potato cDNA yeast library. After high-temperature treatment at 39 °C, the yeast library was subjected to high-throughput sequencing, and a total of 1931 heat resistance candidate genes were screened. Through GO and KEGG analysis, we found they were mainly enriched in “photosynthesis” and “response to stimuli” pathways. Subsequently, 12 randomly selected genes were validated under high temperature, drought, and salt stress using qRT-PCR. All genes were responsive to high temperature, and most were also induced by drought and salt stress. Among them, five genes ectopically expressed in yeast enhance yeast’s tolerance to high temperatures. We provide numerous candidate genes for potato response to high temperature stress, laying the foundation for subsequent analysis of the molecular mechanism of potato response to high temperature. MDPI 2023-10-28 /pmc/articles/PMC10650283/ /pubmed/37960068 http://dx.doi.org/10.3390/plants12213712 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Ke
Wen, Shiqi
Shang, Lina
Li, Yang
Li, Ziyan
Chen, Weixi
Li, Yong
Jian, Hongju
Lyu, Dianqiu
Rapid Identification of High-Temperature Responsive Genes Using Large-Scale Yeast Functional Screening System in Potato
title Rapid Identification of High-Temperature Responsive Genes Using Large-Scale Yeast Functional Screening System in Potato
title_full Rapid Identification of High-Temperature Responsive Genes Using Large-Scale Yeast Functional Screening System in Potato
title_fullStr Rapid Identification of High-Temperature Responsive Genes Using Large-Scale Yeast Functional Screening System in Potato
title_full_unstemmed Rapid Identification of High-Temperature Responsive Genes Using Large-Scale Yeast Functional Screening System in Potato
title_short Rapid Identification of High-Temperature Responsive Genes Using Large-Scale Yeast Functional Screening System in Potato
title_sort rapid identification of high-temperature responsive genes using large-scale yeast functional screening system in potato
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10650283/
https://www.ncbi.nlm.nih.gov/pubmed/37960068
http://dx.doi.org/10.3390/plants12213712
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