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Can Some Viral Respiratory Infections Observed Before the Pandemic Announcement Be Related to SARS-CoV-2?

OBJECTIVE: There have been doubts that SARS-CoV-2 has been circulating before the first case was announced. The aim of this study was to evaluate the possibility of COVID-19 in some cases diagnosed to be viral respiratory tract infection in the pre-pandemic period in our center. MATERIAL AND METHODS...

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Autores principales: Özgen Alpaydın, Aylin, Appak, Özgür, Sinem Gezer, Naciye, Yiğit, Salih, Gündüz Karayazı, Damla, Kuruüzüm, Ziya, Ömeroğlu Şimşek, Gökçen, Özlem Eren Kutsoylu, Oya, Arzu Sayıner, Ayça, Sevinç, Can, Sabri Uçan, Eyüp, Levent Uğur, Yasin, Necati Gökmen, Ali, Yapar, Nur
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Turkish Thoracic Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10652072/
https://www.ncbi.nlm.nih.gov/pubmed/37503645
http://dx.doi.org/10.5152/ThoracResPract.2023.22187
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author Özgen Alpaydın, Aylin
Appak, Özgür
Sinem Gezer, Naciye
Yiğit, Salih
Gündüz Karayazı, Damla
Kuruüzüm, Ziya
Ömeroğlu Şimşek, Gökçen
Özlem Eren Kutsoylu, Oya
Arzu Sayıner, Ayça
Sevinç, Can
Sabri Uçan, Eyüp
Levent Uğur, Yasin
Necati Gökmen, Ali
Yapar, Nur
author_facet Özgen Alpaydın, Aylin
Appak, Özgür
Sinem Gezer, Naciye
Yiğit, Salih
Gündüz Karayazı, Damla
Kuruüzüm, Ziya
Ömeroğlu Şimşek, Gökçen
Özlem Eren Kutsoylu, Oya
Arzu Sayıner, Ayça
Sevinç, Can
Sabri Uçan, Eyüp
Levent Uğur, Yasin
Necati Gökmen, Ali
Yapar, Nur
author_sort Özgen Alpaydın, Aylin
collection PubMed
description OBJECTIVE: There have been doubts that SARS-CoV-2 has been circulating before the first case was announced. The aim of this study was to evaluate the possibility of COVID-19 in some cases diagnosed to be viral respiratory tract infection in the pre-pandemic period in our center. MATERIAL AND METHODS: Patients who were admitted to our hospital’s pulmonary diseases, infectious diseases, and intensive care clinics with the diagnosis of viral respiratory system infection within a 6-month period between October 2019 and March 12, 2020, were screened. Around 248 archived respiratory samples from these patients were analyzed for SARS-CoV-2 ribonucleic acid by real-time-quantitative polymerase chain reaction. The clinical, laboratory, and radiological data of the patients were evaluated. RESULTS: The mean age of the study group was 47.5 (18-89 years); 103 (41.5%) were female and 145 (58.4%) were male. The most common presenting symptoms were cough in 51.6% (n = 128), fever in 42.7% (n = 106), and sputum in 27.0% (n = 67). Sixty-nine percent (n = 172) of the patients were pre-diagnosed to have upper respiratory tract infection and 22.0% (n = 55) had pneumonia, one-third of the patients (n = 84, 33.8%) were followed in the service. Respiratory viruses other than SARS-CoV-2 were detected in 123 (49.6%) patients. Influenza virus (31.9%), rhinovirus (10.5%), and human metapneumovirus (6.5%) were the most common pathogens, while none of the samples were positive for SARS-CoV-2 RNA. Findings that could be significant for COVID-19 pneumonia were detected in the thorax computed tomography of 7 cases. CONCLUSION: The negative SARS-CoV-2 real-time-quantitative polymerase chain reaction results in the respiratory samples of the cases followed up in our hospital for viral pneumonia during the pre-pandemic period support that there was no COVID-19 among our cases during the period in question. However, if clinical suspicion arises, both SARS and non-SARS respiratory viral pathogens should be considered for differential diagnosis.
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spelling pubmed-106520722023-03-01 Can Some Viral Respiratory Infections Observed Before the Pandemic Announcement Be Related to SARS-CoV-2? Özgen Alpaydın, Aylin Appak, Özgür Sinem Gezer, Naciye Yiğit, Salih Gündüz Karayazı, Damla Kuruüzüm, Ziya Ömeroğlu Şimşek, Gökçen Özlem Eren Kutsoylu, Oya Arzu Sayıner, Ayça Sevinç, Can Sabri Uçan, Eyüp Levent Uğur, Yasin Necati Gökmen, Ali Yapar, Nur Thorac Res Pract Original Article OBJECTIVE: There have been doubts that SARS-CoV-2 has been circulating before the first case was announced. The aim of this study was to evaluate the possibility of COVID-19 in some cases diagnosed to be viral respiratory tract infection in the pre-pandemic period in our center. MATERIAL AND METHODS: Patients who were admitted to our hospital’s pulmonary diseases, infectious diseases, and intensive care clinics with the diagnosis of viral respiratory system infection within a 6-month period between October 2019 and March 12, 2020, were screened. Around 248 archived respiratory samples from these patients were analyzed for SARS-CoV-2 ribonucleic acid by real-time-quantitative polymerase chain reaction. The clinical, laboratory, and radiological data of the patients were evaluated. RESULTS: The mean age of the study group was 47.5 (18-89 years); 103 (41.5%) were female and 145 (58.4%) were male. The most common presenting symptoms were cough in 51.6% (n = 128), fever in 42.7% (n = 106), and sputum in 27.0% (n = 67). Sixty-nine percent (n = 172) of the patients were pre-diagnosed to have upper respiratory tract infection and 22.0% (n = 55) had pneumonia, one-third of the patients (n = 84, 33.8%) were followed in the service. Respiratory viruses other than SARS-CoV-2 were detected in 123 (49.6%) patients. Influenza virus (31.9%), rhinovirus (10.5%), and human metapneumovirus (6.5%) were the most common pathogens, while none of the samples were positive for SARS-CoV-2 RNA. Findings that could be significant for COVID-19 pneumonia were detected in the thorax computed tomography of 7 cases. CONCLUSION: The negative SARS-CoV-2 real-time-quantitative polymerase chain reaction results in the respiratory samples of the cases followed up in our hospital for viral pneumonia during the pre-pandemic period support that there was no COVID-19 among our cases during the period in question. However, if clinical suspicion arises, both SARS and non-SARS respiratory viral pathogens should be considered for differential diagnosis. Turkish Thoracic Society 2023-03-01 /pmc/articles/PMC10652072/ /pubmed/37503645 http://dx.doi.org/10.5152/ThoracResPract.2023.22187 Text en 2023 authors https://creativecommons.org/licenses/by-nc/4.0/ Content of this journal is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License. (https://creativecommons.org/licenses/by-nc/4.0/)
spellingShingle Original Article
Özgen Alpaydın, Aylin
Appak, Özgür
Sinem Gezer, Naciye
Yiğit, Salih
Gündüz Karayazı, Damla
Kuruüzüm, Ziya
Ömeroğlu Şimşek, Gökçen
Özlem Eren Kutsoylu, Oya
Arzu Sayıner, Ayça
Sevinç, Can
Sabri Uçan, Eyüp
Levent Uğur, Yasin
Necati Gökmen, Ali
Yapar, Nur
Can Some Viral Respiratory Infections Observed Before the Pandemic Announcement Be Related to SARS-CoV-2?
title Can Some Viral Respiratory Infections Observed Before the Pandemic Announcement Be Related to SARS-CoV-2?
title_full Can Some Viral Respiratory Infections Observed Before the Pandemic Announcement Be Related to SARS-CoV-2?
title_fullStr Can Some Viral Respiratory Infections Observed Before the Pandemic Announcement Be Related to SARS-CoV-2?
title_full_unstemmed Can Some Viral Respiratory Infections Observed Before the Pandemic Announcement Be Related to SARS-CoV-2?
title_short Can Some Viral Respiratory Infections Observed Before the Pandemic Announcement Be Related to SARS-CoV-2?
title_sort can some viral respiratory infections observed before the pandemic announcement be related to sars-cov-2?
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10652072/
https://www.ncbi.nlm.nih.gov/pubmed/37503645
http://dx.doi.org/10.5152/ThoracResPract.2023.22187
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