Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia

Coffee leaf rust, caused by the fungus Hemileia vastatrix (Basidiomycota; Pucciniomycota), is a devastating disease spread worldwide. To improve the available genomes, we use PacBio HiFi sequencing enhanced by Dovetail Omni-C chromatin conformation capture to assemble a highly contiguous 747.98 Mb g...

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Detalles Bibliográficos
Autores principales: Ángel C., Carlos A., Marín-Ramírez, Gustavo A., Maldonado, Carlos E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10652848/
https://www.ncbi.nlm.nih.gov/pubmed/37791781
http://dx.doi.org/10.1128/MRA.00444-23
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author Ángel C., Carlos A.
Marín-Ramírez, Gustavo A.
Maldonado, Carlos E.
author_facet Ángel C., Carlos A.
Marín-Ramírez, Gustavo A.
Maldonado, Carlos E.
author_sort Ángel C., Carlos A.
collection PubMed
description Coffee leaf rust, caused by the fungus Hemileia vastatrix (Basidiomycota; Pucciniomycota), is a devastating disease spread worldwide. To improve the available genomes, we use PacBio HiFi sequencing enhanced by Dovetail Omni-C chromatin conformation capture to assemble a highly contiguous 747.98 Mb genome of an isolate collected from Coffea arabica.
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spelling pubmed-106528482023-10-04 Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia Ángel C., Carlos A. Marín-Ramírez, Gustavo A. Maldonado, Carlos E. Microbiol Resour Announc Genome Sequences Coffee leaf rust, caused by the fungus Hemileia vastatrix (Basidiomycota; Pucciniomycota), is a devastating disease spread worldwide. To improve the available genomes, we use PacBio HiFi sequencing enhanced by Dovetail Omni-C chromatin conformation capture to assemble a highly contiguous 747.98 Mb genome of an isolate collected from Coffea arabica. American Society for Microbiology 2023-10-04 /pmc/articles/PMC10652848/ /pubmed/37791781 http://dx.doi.org/10.1128/MRA.00444-23 Text en Copyright © 2023 Angel et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Ángel C., Carlos A.
Marín-Ramírez, Gustavo A.
Maldonado, Carlos E.
Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia
title Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia
title_full Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia
title_fullStr Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia
title_full_unstemmed Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia
title_short Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia
title_sort genome sequence of hemileia vastatrix berk. and br. (race i), the causal agent of coffee leaf rust, isolate from risaralda, colombia
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10652848/
https://www.ncbi.nlm.nih.gov/pubmed/37791781
http://dx.doi.org/10.1128/MRA.00444-23
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