Draft genome sequence of Pseudomonas sp. ER28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from Alberta, Canada

We report the draft genome sequence of Pseudomonas sp. ER28, capable of utilizing the model naphthenic acid, cyclohexane pentanoic acid, as its sole carbon source. It was recovered from oil sands process-affected water containing cyclic and acyclic naphthenic acids. The genome size is 5.7 Mbp, and t...

Descripción completa

Detalles Bibliográficos
Autores principales: Goff, Kira L., Gauthier, Jeff, Gieg, Lisa M., Kukavica-Ibrulj, Irena, Ramos-Padrón, Esther, Lewenza, Shawn, Levesque, Roger C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10652866/
https://www.ncbi.nlm.nih.gov/pubmed/37874142
http://dx.doi.org/10.1128/MRA.00651-23
_version_ 1785136307408732160
author Goff, Kira L.
Gauthier, Jeff
Gieg, Lisa M.
Kukavica-Ibrulj, Irena
Ramos-Padrón, Esther
Lewenza, Shawn
Levesque, Roger C.
author_facet Goff, Kira L.
Gauthier, Jeff
Gieg, Lisa M.
Kukavica-Ibrulj, Irena
Ramos-Padrón, Esther
Lewenza, Shawn
Levesque, Roger C.
author_sort Goff, Kira L.
collection PubMed
description We report the draft genome sequence of Pseudomonas sp. ER28, capable of utilizing the model naphthenic acid, cyclohexane pentanoic acid, as its sole carbon source. It was recovered from oil sands process-affected water containing cyclic and acyclic naphthenic acids. The genome size is 5.7 Mbp, and the G + C content is 60%.
format Online
Article
Text
id pubmed-10652866
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-106528662023-10-24 Draft genome sequence of Pseudomonas sp. ER28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from Alberta, Canada Goff, Kira L. Gauthier, Jeff Gieg, Lisa M. Kukavica-Ibrulj, Irena Ramos-Padrón, Esther Lewenza, Shawn Levesque, Roger C. Microbiol Resour Announc Genome Sequences We report the draft genome sequence of Pseudomonas sp. ER28, capable of utilizing the model naphthenic acid, cyclohexane pentanoic acid, as its sole carbon source. It was recovered from oil sands process-affected water containing cyclic and acyclic naphthenic acids. The genome size is 5.7 Mbp, and the G + C content is 60%. American Society for Microbiology 2023-10-24 /pmc/articles/PMC10652866/ /pubmed/37874142 http://dx.doi.org/10.1128/MRA.00651-23 Text en Copyright © 2023 Goff et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Goff, Kira L.
Gauthier, Jeff
Gieg, Lisa M.
Kukavica-Ibrulj, Irena
Ramos-Padrón, Esther
Lewenza, Shawn
Levesque, Roger C.
Draft genome sequence of Pseudomonas sp. ER28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from Alberta, Canada
title Draft genome sequence of Pseudomonas sp. ER28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from Alberta, Canada
title_full Draft genome sequence of Pseudomonas sp. ER28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from Alberta, Canada
title_fullStr Draft genome sequence of Pseudomonas sp. ER28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from Alberta, Canada
title_full_unstemmed Draft genome sequence of Pseudomonas sp. ER28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from Alberta, Canada
title_short Draft genome sequence of Pseudomonas sp. ER28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from Alberta, Canada
title_sort draft genome sequence of pseudomonas sp. er28, a cyclohexane pentanoic acid degrader isolated from oil sands process-affected water from alberta, canada
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10652866/
https://www.ncbi.nlm.nih.gov/pubmed/37874142
http://dx.doi.org/10.1128/MRA.00651-23
work_keys_str_mv AT goffkiral draftgenomesequenceofpseudomonassper28acyclohexanepentanoicaciddegraderisolatedfromoilsandsprocessaffectedwaterfromalbertacanada
AT gauthierjeff draftgenomesequenceofpseudomonassper28acyclohexanepentanoicaciddegraderisolatedfromoilsandsprocessaffectedwaterfromalbertacanada
AT gieglisam draftgenomesequenceofpseudomonassper28acyclohexanepentanoicaciddegraderisolatedfromoilsandsprocessaffectedwaterfromalbertacanada
AT kukavicaibruljirena draftgenomesequenceofpseudomonassper28acyclohexanepentanoicaciddegraderisolatedfromoilsandsprocessaffectedwaterfromalbertacanada
AT ramospadronesther draftgenomesequenceofpseudomonassper28acyclohexanepentanoicaciddegraderisolatedfromoilsandsprocessaffectedwaterfromalbertacanada
AT lewenzashawn draftgenomesequenceofpseudomonassper28acyclohexanepentanoicaciddegraderisolatedfromoilsandsprocessaffectedwaterfromalbertacanada
AT levesquerogerc draftgenomesequenceofpseudomonassper28acyclohexanepentanoicaciddegraderisolatedfromoilsandsprocessaffectedwaterfromalbertacanada

Ejemplares similares