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MANet: a multi-attention network for automatic liver tumor segmentation in computed tomography (CT) imaging

Automatic liver tumor segmentation is a paramount important application for liver tumor diagnosis and treatment planning. However, it has become a highly challenging task due to the heterogeneity of the tumor shape and intensity variation. Automatic liver tumor segmentation is capable to establish t...

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Autores principales: Hettihewa, Kasun, Kobchaisawat, Thananop, Tanpowpong, Natthaporn, Chalidabhongse, Thanarat H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10654423/
https://www.ncbi.nlm.nih.gov/pubmed/37973987
http://dx.doi.org/10.1038/s41598-023-46580-4
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author Hettihewa, Kasun
Kobchaisawat, Thananop
Tanpowpong, Natthaporn
Chalidabhongse, Thanarat H.
author_facet Hettihewa, Kasun
Kobchaisawat, Thananop
Tanpowpong, Natthaporn
Chalidabhongse, Thanarat H.
author_sort Hettihewa, Kasun
collection PubMed
description Automatic liver tumor segmentation is a paramount important application for liver tumor diagnosis and treatment planning. However, it has become a highly challenging task due to the heterogeneity of the tumor shape and intensity variation. Automatic liver tumor segmentation is capable to establish the diagnostic standard to provide relevant radiological information to all levels of expertise. Recently, deep convolutional neural networks have demonstrated superiority in feature extraction and learning in medical image segmentation. However, multi-layer dense feature stacks make the model quite inconsistent in imitating visual attention and awareness of radiological expertise for tumor recognition and segmentation task. To bridge that visual attention capability, attention mechanisms have developed for better feature selection. In this paper, we propose a novel network named Multi Attention Network (MANet) as a fusion of attention mechanisms to learn highlighting important features while suppressing irrelevant features for the tumor segmentation task. The proposed deep learning network has followed U-Net as the basic architecture. Moreover, residual mechanism is implemented in the encoder. Convolutional block attention module has split into channel attention and spatial attention modules to implement in encoder and decoder of the proposed architecture. The attention mechanism in Attention U-Net is integrated to extract low-level features to combine with high-level ones. The developed deep learning architecture is trained and evaluated on the publicly available MICCAI 2017 Liver Tumor Segmentation dataset and 3DIRCADb dataset under various evaluation metrics. MANet demonstrated promising results compared to state-of-the-art methods with comparatively small parameter overhead.
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spelling pubmed-106544232023-11-16 MANet: a multi-attention network for automatic liver tumor segmentation in computed tomography (CT) imaging Hettihewa, Kasun Kobchaisawat, Thananop Tanpowpong, Natthaporn Chalidabhongse, Thanarat H. Sci Rep Article Automatic liver tumor segmentation is a paramount important application for liver tumor diagnosis and treatment planning. However, it has become a highly challenging task due to the heterogeneity of the tumor shape and intensity variation. Automatic liver tumor segmentation is capable to establish the diagnostic standard to provide relevant radiological information to all levels of expertise. Recently, deep convolutional neural networks have demonstrated superiority in feature extraction and learning in medical image segmentation. However, multi-layer dense feature stacks make the model quite inconsistent in imitating visual attention and awareness of radiological expertise for tumor recognition and segmentation task. To bridge that visual attention capability, attention mechanisms have developed for better feature selection. In this paper, we propose a novel network named Multi Attention Network (MANet) as a fusion of attention mechanisms to learn highlighting important features while suppressing irrelevant features for the tumor segmentation task. The proposed deep learning network has followed U-Net as the basic architecture. Moreover, residual mechanism is implemented in the encoder. Convolutional block attention module has split into channel attention and spatial attention modules to implement in encoder and decoder of the proposed architecture. The attention mechanism in Attention U-Net is integrated to extract low-level features to combine with high-level ones. The developed deep learning architecture is trained and evaluated on the publicly available MICCAI 2017 Liver Tumor Segmentation dataset and 3DIRCADb dataset under various evaluation metrics. MANet demonstrated promising results compared to state-of-the-art methods with comparatively small parameter overhead. Nature Publishing Group UK 2023-11-16 /pmc/articles/PMC10654423/ /pubmed/37973987 http://dx.doi.org/10.1038/s41598-023-46580-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Hettihewa, Kasun
Kobchaisawat, Thananop
Tanpowpong, Natthaporn
Chalidabhongse, Thanarat H.
MANet: a multi-attention network for automatic liver tumor segmentation in computed tomography (CT) imaging
title MANet: a multi-attention network for automatic liver tumor segmentation in computed tomography (CT) imaging
title_full MANet: a multi-attention network for automatic liver tumor segmentation in computed tomography (CT) imaging
title_fullStr MANet: a multi-attention network for automatic liver tumor segmentation in computed tomography (CT) imaging
title_full_unstemmed MANet: a multi-attention network for automatic liver tumor segmentation in computed tomography (CT) imaging
title_short MANet: a multi-attention network for automatic liver tumor segmentation in computed tomography (CT) imaging
title_sort manet: a multi-attention network for automatic liver tumor segmentation in computed tomography (ct) imaging
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10654423/
https://www.ncbi.nlm.nih.gov/pubmed/37973987
http://dx.doi.org/10.1038/s41598-023-46580-4
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