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Spatial-temporal simulation for hospital infection spread and outbreaks of Clostridioides difficile

Validated and curated datasets are essential for studying the spread and control of infectious diseases in hospital settings, requiring clinical information on patients’ evolution and their location. The literature shows that approaches based on Artificial Intelligence (AI) in the development of cli...

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Autores principales: Kim, Denisse, Canovas-Segura, Bernardo, Jimeno-Almazán, Amaya, Campos, Manuel, Juarez, Jose M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10654661/
https://www.ncbi.nlm.nih.gov/pubmed/37974000
http://dx.doi.org/10.1038/s41598-023-47296-1
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author Kim, Denisse
Canovas-Segura, Bernardo
Jimeno-Almazán, Amaya
Campos, Manuel
Juarez, Jose M.
author_facet Kim, Denisse
Canovas-Segura, Bernardo
Jimeno-Almazán, Amaya
Campos, Manuel
Juarez, Jose M.
author_sort Kim, Denisse
collection PubMed
description Validated and curated datasets are essential for studying the spread and control of infectious diseases in hospital settings, requiring clinical information on patients’ evolution and their location. The literature shows that approaches based on Artificial Intelligence (AI) in the development of clinical-support systems have benefits that are increasingly recognized. However, there is a lack of available high-volume data, necessary for trusting such AI models. One effective method in this situation involves the simulation of realistic data. Existing simulators primarily focus on implementing compartmental epidemiological models and contact networks to validate epidemiological hypotheses. Nevertheless, other practical aspects such as the hospital building distribution, shifts or safety policies on infections has received minimal attention. In this paper, we propose a novel approach for a simulator of nosocomial infection spread, combining agent-based patient description, spatial-temporal constraints of the hospital settings, and microorganism behavior driven by epidemiological models. The predictive validity of the model was analyzed considering micro and macro-face validation, parameter calibration based on literature review, model alignment, and sensitive analysis with an expert. This simulation model is useful in monitoring infections and in the decision-making process in a hospital, by helping to detect spatial-temporal patterns and predict statistical data about the disease.
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spelling pubmed-106546612023-11-16 Spatial-temporal simulation for hospital infection spread and outbreaks of Clostridioides difficile Kim, Denisse Canovas-Segura, Bernardo Jimeno-Almazán, Amaya Campos, Manuel Juarez, Jose M. Sci Rep Article Validated and curated datasets are essential for studying the spread and control of infectious diseases in hospital settings, requiring clinical information on patients’ evolution and their location. The literature shows that approaches based on Artificial Intelligence (AI) in the development of clinical-support systems have benefits that are increasingly recognized. However, there is a lack of available high-volume data, necessary for trusting such AI models. One effective method in this situation involves the simulation of realistic data. Existing simulators primarily focus on implementing compartmental epidemiological models and contact networks to validate epidemiological hypotheses. Nevertheless, other practical aspects such as the hospital building distribution, shifts or safety policies on infections has received minimal attention. In this paper, we propose a novel approach for a simulator of nosocomial infection spread, combining agent-based patient description, spatial-temporal constraints of the hospital settings, and microorganism behavior driven by epidemiological models. The predictive validity of the model was analyzed considering micro and macro-face validation, parameter calibration based on literature review, model alignment, and sensitive analysis with an expert. This simulation model is useful in monitoring infections and in the decision-making process in a hospital, by helping to detect spatial-temporal patterns and predict statistical data about the disease. Nature Publishing Group UK 2023-11-16 /pmc/articles/PMC10654661/ /pubmed/37974000 http://dx.doi.org/10.1038/s41598-023-47296-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kim, Denisse
Canovas-Segura, Bernardo
Jimeno-Almazán, Amaya
Campos, Manuel
Juarez, Jose M.
Spatial-temporal simulation for hospital infection spread and outbreaks of Clostridioides difficile
title Spatial-temporal simulation for hospital infection spread and outbreaks of Clostridioides difficile
title_full Spatial-temporal simulation for hospital infection spread and outbreaks of Clostridioides difficile
title_fullStr Spatial-temporal simulation for hospital infection spread and outbreaks of Clostridioides difficile
title_full_unstemmed Spatial-temporal simulation for hospital infection spread and outbreaks of Clostridioides difficile
title_short Spatial-temporal simulation for hospital infection spread and outbreaks of Clostridioides difficile
title_sort spatial-temporal simulation for hospital infection spread and outbreaks of clostridioides difficile
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10654661/
https://www.ncbi.nlm.nih.gov/pubmed/37974000
http://dx.doi.org/10.1038/s41598-023-47296-1
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