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Profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics
BACKGROUND: The morbidity of cancer keeps growing worldwide, and among that, the colorectal cancer (CRC) has jumped to third. Existing early screening tests for CRC are limited. The aim of this study was to develop a diagnostic strategy for CRC by plasma metabolomics. METHODS: A targeted amino acids...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10655464/ https://www.ncbi.nlm.nih.gov/pubmed/37978537 http://dx.doi.org/10.1186/s12967-023-04604-7 |
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author | Yang, Yang Wang, Zhipeng Li, Xinxing Lv, Jianfeng Zhong, Renqian Gao, Shouhong Zhang, Feng Chen, Wansheng |
author_facet | Yang, Yang Wang, Zhipeng Li, Xinxing Lv, Jianfeng Zhong, Renqian Gao, Shouhong Zhang, Feng Chen, Wansheng |
author_sort | Yang, Yang |
collection | PubMed |
description | BACKGROUND: The morbidity of cancer keeps growing worldwide, and among that, the colorectal cancer (CRC) has jumped to third. Existing early screening tests for CRC are limited. The aim of this study was to develop a diagnostic strategy for CRC by plasma metabolomics. METHODS: A targeted amino acids metabolomics method was developed to quantify 32 plasma amino acids in 130 CRC patients and 216 healthy volunteers, to identify potential biomarkers for CRC, and an independent sample cohort comprising 116 CRC subjects, 33 precancerosiss patients and 195 healthy volunteers was further used to validate the diagnostic model. Amino acids-related genes were retrieved from Gene Expression Omnibus and Molecular Signatures Database and analyzed. RESULTS: Three were chosen out of the 32 plasma amino acids examined. The tryptophan / sarcosine / glutamic acid -based receiver operating characteristic (ROC) curve showed the area under the curve (AUC) of 0.955 (specificity 83.3% and sensitivity 96.8%) for all participants, and the logistic regression model were used to distinguish between early stage (I and II) of CRC and precancerosiss patients, which showed superiority to the commonly used carcinoembryonic antigen. The GO and KEGG enrichment analysis proved many alterations in amino acids metabolic pathways in tumorigenesis. CONCLUSION: This altered plasma amino acid profile could effectively distinguish CRC patients from precancerosiss patients and healthy volunteers with high accuracy. Prognostic tests based on the tryptophan/sarcosine/glutamic acid biomarkers in the large population could assess the clinical significance of CRC early detection and intervention. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-023-04604-7. |
format | Online Article Text |
id | pubmed-10655464 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-106554642023-11-17 Profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics Yang, Yang Wang, Zhipeng Li, Xinxing Lv, Jianfeng Zhong, Renqian Gao, Shouhong Zhang, Feng Chen, Wansheng J Transl Med Research BACKGROUND: The morbidity of cancer keeps growing worldwide, and among that, the colorectal cancer (CRC) has jumped to third. Existing early screening tests for CRC are limited. The aim of this study was to develop a diagnostic strategy for CRC by plasma metabolomics. METHODS: A targeted amino acids metabolomics method was developed to quantify 32 plasma amino acids in 130 CRC patients and 216 healthy volunteers, to identify potential biomarkers for CRC, and an independent sample cohort comprising 116 CRC subjects, 33 precancerosiss patients and 195 healthy volunteers was further used to validate the diagnostic model. Amino acids-related genes were retrieved from Gene Expression Omnibus and Molecular Signatures Database and analyzed. RESULTS: Three were chosen out of the 32 plasma amino acids examined. The tryptophan / sarcosine / glutamic acid -based receiver operating characteristic (ROC) curve showed the area under the curve (AUC) of 0.955 (specificity 83.3% and sensitivity 96.8%) for all participants, and the logistic regression model were used to distinguish between early stage (I and II) of CRC and precancerosiss patients, which showed superiority to the commonly used carcinoembryonic antigen. The GO and KEGG enrichment analysis proved many alterations in amino acids metabolic pathways in tumorigenesis. CONCLUSION: This altered plasma amino acid profile could effectively distinguish CRC patients from precancerosiss patients and healthy volunteers with high accuracy. Prognostic tests based on the tryptophan/sarcosine/glutamic acid biomarkers in the large population could assess the clinical significance of CRC early detection and intervention. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12967-023-04604-7. BioMed Central 2023-11-17 /pmc/articles/PMC10655464/ /pubmed/37978537 http://dx.doi.org/10.1186/s12967-023-04604-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Yang, Yang Wang, Zhipeng Li, Xinxing Lv, Jianfeng Zhong, Renqian Gao, Shouhong Zhang, Feng Chen, Wansheng Profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics |
title | Profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics |
title_full | Profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics |
title_fullStr | Profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics |
title_full_unstemmed | Profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics |
title_short | Profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics |
title_sort | profiling the metabolic disorder and detection of colorectal cancer based on targeted amino acids metabolomics |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10655464/ https://www.ncbi.nlm.nih.gov/pubmed/37978537 http://dx.doi.org/10.1186/s12967-023-04604-7 |
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