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Regulation of species metabolism in synthetic community systems by environmental pH oscillations

Constructing a synthetic community system helps scientist understand the complex interactions among species in a community and its environment. Herein, a two-species community is constructed with species A (artificial cells encapsulating pH-responsive molecules and sucrose) and species B (Saccharomy...

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Autores principales: Li, Shubin, Zhao, Yingming, Wu, Shuqi, Zhang, Xiangxiang, Yang, Boyu, Tian, Liangfei, Han, Xiaojun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10657449/
https://www.ncbi.nlm.nih.gov/pubmed/37980410
http://dx.doi.org/10.1038/s41467-023-43398-6
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author Li, Shubin
Zhao, Yingming
Wu, Shuqi
Zhang, Xiangxiang
Yang, Boyu
Tian, Liangfei
Han, Xiaojun
author_facet Li, Shubin
Zhao, Yingming
Wu, Shuqi
Zhang, Xiangxiang
Yang, Boyu
Tian, Liangfei
Han, Xiaojun
author_sort Li, Shubin
collection PubMed
description Constructing a synthetic community system helps scientist understand the complex interactions among species in a community and its environment. Herein, a two-species community is constructed with species A (artificial cells encapsulating pH-responsive molecules and sucrose) and species B (Saccharomyces cerevisiae), which causes the environment to exhibit pH oscillation behaviour due to the generation and dissipation of CO(2). In addition, a three-species community is constructed with species A′ (artificial cells containing sucrose and G6P), species B, and species C (artificial cells containing NAD(+) and G6PDH). The solution pH oscillation regulates the periodical release of G6P from species A′; G6P then enters species C to promote the metabolic reaction that converts NAD(+) to NADH. The location of species A′ and B determines the metabolism behaviour in species C in the spatially coded three-species communities with CA′B, CBA′, and A′CB patterns. The proposed synthetic community system provides a foundation to construct a more complicated microecosystem.
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spelling pubmed-106574492023-11-18 Regulation of species metabolism in synthetic community systems by environmental pH oscillations Li, Shubin Zhao, Yingming Wu, Shuqi Zhang, Xiangxiang Yang, Boyu Tian, Liangfei Han, Xiaojun Nat Commun Article Constructing a synthetic community system helps scientist understand the complex interactions among species in a community and its environment. Herein, a two-species community is constructed with species A (artificial cells encapsulating pH-responsive molecules and sucrose) and species B (Saccharomyces cerevisiae), which causes the environment to exhibit pH oscillation behaviour due to the generation and dissipation of CO(2). In addition, a three-species community is constructed with species A′ (artificial cells containing sucrose and G6P), species B, and species C (artificial cells containing NAD(+) and G6PDH). The solution pH oscillation regulates the periodical release of G6P from species A′; G6P then enters species C to promote the metabolic reaction that converts NAD(+) to NADH. The location of species A′ and B determines the metabolism behaviour in species C in the spatially coded three-species communities with CA′B, CBA′, and A′CB patterns. The proposed synthetic community system provides a foundation to construct a more complicated microecosystem. Nature Publishing Group UK 2023-11-18 /pmc/articles/PMC10657449/ /pubmed/37980410 http://dx.doi.org/10.1038/s41467-023-43398-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Li, Shubin
Zhao, Yingming
Wu, Shuqi
Zhang, Xiangxiang
Yang, Boyu
Tian, Liangfei
Han, Xiaojun
Regulation of species metabolism in synthetic community systems by environmental pH oscillations
title Regulation of species metabolism in synthetic community systems by environmental pH oscillations
title_full Regulation of species metabolism in synthetic community systems by environmental pH oscillations
title_fullStr Regulation of species metabolism in synthetic community systems by environmental pH oscillations
title_full_unstemmed Regulation of species metabolism in synthetic community systems by environmental pH oscillations
title_short Regulation of species metabolism in synthetic community systems by environmental pH oscillations
title_sort regulation of species metabolism in synthetic community systems by environmental ph oscillations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10657449/
https://www.ncbi.nlm.nih.gov/pubmed/37980410
http://dx.doi.org/10.1038/s41467-023-43398-6
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