Cargando…

Dense neural network outperforms other machine learning models for scaling-up lichen cover maps in Eastern Canada

Lichen mapping is vital for caribou management plans and sustainable land conservation. Previous studies have used random forest, dense neural network, and convolutional neural network models for mapping lichen coverage. However, to date, it is not clear how these models rank in this task. In this s...

Descripción completa

Detalles Bibliográficos
Autores principales: Richardson, Galen, Knudby, Anders, Chen, Wenjun, Sawada, Michael, Lovitt, Julie, He, Liming, Naeni, Leila Yousefizadeh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10659193/
https://www.ncbi.nlm.nih.gov/pubmed/37983235
http://dx.doi.org/10.1371/journal.pone.0292839
_version_ 1785148292459397120
author Richardson, Galen
Knudby, Anders
Chen, Wenjun
Sawada, Michael
Lovitt, Julie
He, Liming
Naeni, Leila Yousefizadeh
author_facet Richardson, Galen
Knudby, Anders
Chen, Wenjun
Sawada, Michael
Lovitt, Julie
He, Liming
Naeni, Leila Yousefizadeh
author_sort Richardson, Galen
collection PubMed
description Lichen mapping is vital for caribou management plans and sustainable land conservation. Previous studies have used random forest, dense neural network, and convolutional neural network models for mapping lichen coverage. However, to date, it is not clear how these models rank in this task. In this study, these machine learning models were evaluated on their ability to predict lichen percent coverage in Sentinel-2 imagery in Québec and Labrador, Canada. The models were trained on 10-m resolution lichen coverage (%) maps created from 20 drone surveys collected in July 2019 and 2022. The dense neural network achieved a higher accuracy than the other two, with a reported mean absolute error of 5.2% and an R(2) of 0.76. By comparison, the random forest model returned a mean absolute error of 5.5% (R(2): 0.74) and the convolutional neural network had a mean absolute error of 5.3% (R(2): 0.74). A regional lichen map was created using the trained dense neural network and a Sentinel-2 imagery mosaic. There was greater uncertainty on land covers that the model was not exposed to in training, such as mines and deep lakes. While the dense neural network requires more computational effort to train than a random forest model, the 5.9% performance gain in the test pixel comparison renders it the most suitable for lichen mapping. This study represents progress toward determining the appropriate methodology for generating accurate lichen maps from satellite imagery for caribou conservation and sustainable land management.
format Online
Article
Text
id pubmed-10659193
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-106591932023-11-20 Dense neural network outperforms other machine learning models for scaling-up lichen cover maps in Eastern Canada Richardson, Galen Knudby, Anders Chen, Wenjun Sawada, Michael Lovitt, Julie He, Liming Naeni, Leila Yousefizadeh PLoS One Research Article Lichen mapping is vital for caribou management plans and sustainable land conservation. Previous studies have used random forest, dense neural network, and convolutional neural network models for mapping lichen coverage. However, to date, it is not clear how these models rank in this task. In this study, these machine learning models were evaluated on their ability to predict lichen percent coverage in Sentinel-2 imagery in Québec and Labrador, Canada. The models were trained on 10-m resolution lichen coverage (%) maps created from 20 drone surveys collected in July 2019 and 2022. The dense neural network achieved a higher accuracy than the other two, with a reported mean absolute error of 5.2% and an R(2) of 0.76. By comparison, the random forest model returned a mean absolute error of 5.5% (R(2): 0.74) and the convolutional neural network had a mean absolute error of 5.3% (R(2): 0.74). A regional lichen map was created using the trained dense neural network and a Sentinel-2 imagery mosaic. There was greater uncertainty on land covers that the model was not exposed to in training, such as mines and deep lakes. While the dense neural network requires more computational effort to train than a random forest model, the 5.9% performance gain in the test pixel comparison renders it the most suitable for lichen mapping. This study represents progress toward determining the appropriate methodology for generating accurate lichen maps from satellite imagery for caribou conservation and sustainable land management. Public Library of Science 2023-11-20 /pmc/articles/PMC10659193/ /pubmed/37983235 http://dx.doi.org/10.1371/journal.pone.0292839 Text en © 2023 Richardson et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Richardson, Galen
Knudby, Anders
Chen, Wenjun
Sawada, Michael
Lovitt, Julie
He, Liming
Naeni, Leila Yousefizadeh
Dense neural network outperforms other machine learning models for scaling-up lichen cover maps in Eastern Canada
title Dense neural network outperforms other machine learning models for scaling-up lichen cover maps in Eastern Canada
title_full Dense neural network outperforms other machine learning models for scaling-up lichen cover maps in Eastern Canada
title_fullStr Dense neural network outperforms other machine learning models for scaling-up lichen cover maps in Eastern Canada
title_full_unstemmed Dense neural network outperforms other machine learning models for scaling-up lichen cover maps in Eastern Canada
title_short Dense neural network outperforms other machine learning models for scaling-up lichen cover maps in Eastern Canada
title_sort dense neural network outperforms other machine learning models for scaling-up lichen cover maps in eastern canada
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10659193/
https://www.ncbi.nlm.nih.gov/pubmed/37983235
http://dx.doi.org/10.1371/journal.pone.0292839
work_keys_str_mv AT richardsongalen denseneuralnetworkoutperformsothermachinelearningmodelsforscalinguplichencovermapsineasterncanada
AT knudbyanders denseneuralnetworkoutperformsothermachinelearningmodelsforscalinguplichencovermapsineasterncanada
AT chenwenjun denseneuralnetworkoutperformsothermachinelearningmodelsforscalinguplichencovermapsineasterncanada
AT sawadamichael denseneuralnetworkoutperformsothermachinelearningmodelsforscalinguplichencovermapsineasterncanada
AT lovittjulie denseneuralnetworkoutperformsothermachinelearningmodelsforscalinguplichencovermapsineasterncanada
AT heliming denseneuralnetworkoutperformsothermachinelearningmodelsforscalinguplichencovermapsineasterncanada
AT naenileilayousefizadeh denseneuralnetworkoutperformsothermachinelearningmodelsforscalinguplichencovermapsineasterncanada