Cargando…
syntenyPlotteR: a user-friendly R package to visualize genome synteny, ideal for both experienced and novice bioinformaticians
MOTIVATION: The rapid increase in the number of chromosome-scale genome assemblies has renewed interest in chromosome evolution studies. The visualization of syntenic relationships between genomes is a crucial initial step in the study of chromosome rearrangements and evolution. There are few tools...
Autores principales: | Quigley, Sarah, Damas, Joana, Larkin, Denis M, Farré, Marta |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10660287/ https://www.ncbi.nlm.nih.gov/pubmed/38023328 http://dx.doi.org/10.1093/bioadv/vbad161 |
Ejemplares similares
-
syntenet: an R/Bioconductor package for the inference and analysis of synteny networks
por: Almeida-Silva, Fabricio, et al.
Publicado: (2022) -
r2cat: synteny plots and comparative assembly
por: Husemann, Peter, et al.
Publicado: (2010) -
mySyntenyPortal: an application package to construct websites for synteny block analysis
por: Lee, Jongin, et al.
Publicado: (2018) -
WASPS: web-assisted symbolic plasmid synteny server
por: Badel, Catherine, et al.
Publicado: (2020) -
SyntenyTracker: a tool for defining homologous synteny blocks using radiation hybrid maps and whole-genome sequence
por: Donthu, Ravikiran, et al.
Publicado: (2009)