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A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae

[Image: see text] Synthetic biology toolkits are one of the core foundations on which the field has been built, facilitating and accelerating efforts to reprogram cells and organisms for diverse biotechnological applications. The yeast Saccharomyces cerevisiae, an important model and industrial orga...

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Autores principales: Shaw, William M., Khalil, Ahmad S., Ellis, Tom
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10661031/
https://www.ncbi.nlm.nih.gov/pubmed/37930278
http://dx.doi.org/10.1021/acssynbio.3c00423
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author Shaw, William M.
Khalil, Ahmad S.
Ellis, Tom
author_facet Shaw, William M.
Khalil, Ahmad S.
Ellis, Tom
author_sort Shaw, William M.
collection PubMed
description [Image: see text] Synthetic biology toolkits are one of the core foundations on which the field has been built, facilitating and accelerating efforts to reprogram cells and organisms for diverse biotechnological applications. The yeast Saccharomyces cerevisiae, an important model and industrial organism, has benefited from a wide range of toolkits. In particular, the MoClo Yeast Toolkit (YTK) enables the fast and straightforward construction of multigene plasmids from a library of highly characterized parts for programming new cellular behavior in a more predictable manner. While YTK has cultivated a strong parts ecosystem and excels in plasmid construction, it is limited in the extent and flexibility with which it can create new strains of yeast. Here, we describe a new and improved toolkit, the Multiplex Yeast Toolkit (MYT), that extends the capabilities of YTK and addresses strain engineering limitations. MYT provides a set of new integration vectors and selectable markers usable across common laboratory strains, as well as additional assembly cassettes to increase the number of transcriptional units in multigene constructs, CRISPR-Cas9 tools for highly efficient multiplexed vector integration, and three orthogonal and inducible promoter systems for conditional programming of gene expression. With these tools, we provide yeast synthetic biologists with a powerful platform to take their engineering ambitions to exciting new levels.
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spelling pubmed-106610312023-11-21 A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae Shaw, William M. Khalil, Ahmad S. Ellis, Tom ACS Synth Biol [Image: see text] Synthetic biology toolkits are one of the core foundations on which the field has been built, facilitating and accelerating efforts to reprogram cells and organisms for diverse biotechnological applications. The yeast Saccharomyces cerevisiae, an important model and industrial organism, has benefited from a wide range of toolkits. In particular, the MoClo Yeast Toolkit (YTK) enables the fast and straightforward construction of multigene plasmids from a library of highly characterized parts for programming new cellular behavior in a more predictable manner. While YTK has cultivated a strong parts ecosystem and excels in plasmid construction, it is limited in the extent and flexibility with which it can create new strains of yeast. Here, we describe a new and improved toolkit, the Multiplex Yeast Toolkit (MYT), that extends the capabilities of YTK and addresses strain engineering limitations. MYT provides a set of new integration vectors and selectable markers usable across common laboratory strains, as well as additional assembly cassettes to increase the number of transcriptional units in multigene constructs, CRISPR-Cas9 tools for highly efficient multiplexed vector integration, and three orthogonal and inducible promoter systems for conditional programming of gene expression. With these tools, we provide yeast synthetic biologists with a powerful platform to take their engineering ambitions to exciting new levels. American Chemical Society 2023-11-06 /pmc/articles/PMC10661031/ /pubmed/37930278 http://dx.doi.org/10.1021/acssynbio.3c00423 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Shaw, William M.
Khalil, Ahmad S.
Ellis, Tom
A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae
title A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae
title_full A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae
title_fullStr A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae
title_full_unstemmed A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae
title_short A Multiplex MoClo Toolkit for Extensive and Flexible Engineering of Saccharomyces cerevisiae
title_sort multiplex moclo toolkit for extensive and flexible engineering of saccharomyces cerevisiae
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10661031/
https://www.ncbi.nlm.nih.gov/pubmed/37930278
http://dx.doi.org/10.1021/acssynbio.3c00423
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