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3D QSAR study on substituted 1, 2, 4 triazole derivatives as anticancer agents by kNN MFA approach
BACKGROUND AND OBJECTIVES: Researchers have recently focused on the biological and synthetic effects of 1, 2, and 4-triazole fused heterocyclic molecules because they have tremendous medicinal value. The objective of the present study was to carry out the 3D QSAR evaluation on the substituted 1,2, a...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10661185/ https://www.ncbi.nlm.nih.gov/pubmed/38028224 http://dx.doi.org/10.1016/j.jsps.2023.101836 |
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author | Desai, Shailaja P. Mohite, S.K. Alobid, Saad Saralaya, M.G. Patil, Ashwini S Das, Kuntal Almadani, Moneer E. Arif Hussain, Syed Hussain Alamer, Bader Abdulrahman Jibreel, Ebtesam Ibrahim Almoteer, Ali Mohammed Basheeruddin Asdaq, Syed |
author_facet | Desai, Shailaja P. Mohite, S.K. Alobid, Saad Saralaya, M.G. Patil, Ashwini S Das, Kuntal Almadani, Moneer E. Arif Hussain, Syed Hussain Alamer, Bader Abdulrahman Jibreel, Ebtesam Ibrahim Almoteer, Ali Mohammed Basheeruddin Asdaq, Syed |
author_sort | Desai, Shailaja P. |
collection | PubMed |
description | BACKGROUND AND OBJECTIVES: Researchers have recently focused on the biological and synthetic effects of 1, 2, and 4-triazole fused heterocyclic molecules because they have tremendous medicinal value. The objective of the present study was to carry out the 3D QSAR evaluation on the substituted 1,2, and 4 triazole derivatives for anticancer potential using k-Nearest Neighbor-Molecular Field Analysis (kNN-MFA) method. METHODS: Using the molecular design suite, a three-dimensional quantitative structure–activity relationship (3D-QSAR) analysis was undertaken on a series of 4-amino-5-(pyridin3yl)-4H-1, 2, and 4-triazole-3-thiol anticancer drugs (Vlife MDS). This study used a genetic algorithm and a manual selection approach on 20 substituted 1, 2, and 4-triazole derivatives. Based on the genetic algorithm (GA), the 3D-QSAR model was generated. Statistical significance and predictive capacity were evaluated using internal and external validation. RESULTS: The most significant model has a correlation coefficient of 0.9334 (squared correlation coefficient r2 = 0.8713), showing that biological activity and descriptors have a strong relationship. The model exhibited internal predictivity of 74.45 percent (q2 = 0.2129), external predictivity of 81.09 percent (pred r2 = 0.8417), and the smallest error term for the predictive correlation coefficient (pred r2se = 0.1255). The model revealed steric (S 1047––0.0780––0.0451S 927) and electrostatic (E 1002) data points that contribute remarkably to anticancer activity. A molecular field study demonstrates a link between the structural features of substituted triazole derivatives and their activities. CONCLUSION: The good-to-moderate anticancer potential of compounds confirms the significant pharmacological role of 1,2,4-triazole derivatives. These results could lead to the identification of potential chemical compounds with optimal anticancer activity and minimal side effects. |
format | Online Article Text |
id | pubmed-10661185 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-106611852023-10-24 3D QSAR study on substituted 1, 2, 4 triazole derivatives as anticancer agents by kNN MFA approach Desai, Shailaja P. Mohite, S.K. Alobid, Saad Saralaya, M.G. Patil, Ashwini S Das, Kuntal Almadani, Moneer E. Arif Hussain, Syed Hussain Alamer, Bader Abdulrahman Jibreel, Ebtesam Ibrahim Almoteer, Ali Mohammed Basheeruddin Asdaq, Syed Saudi Pharm J Original Article BACKGROUND AND OBJECTIVES: Researchers have recently focused on the biological and synthetic effects of 1, 2, and 4-triazole fused heterocyclic molecules because they have tremendous medicinal value. The objective of the present study was to carry out the 3D QSAR evaluation on the substituted 1,2, and 4 triazole derivatives for anticancer potential using k-Nearest Neighbor-Molecular Field Analysis (kNN-MFA) method. METHODS: Using the molecular design suite, a three-dimensional quantitative structure–activity relationship (3D-QSAR) analysis was undertaken on a series of 4-amino-5-(pyridin3yl)-4H-1, 2, and 4-triazole-3-thiol anticancer drugs (Vlife MDS). This study used a genetic algorithm and a manual selection approach on 20 substituted 1, 2, and 4-triazole derivatives. Based on the genetic algorithm (GA), the 3D-QSAR model was generated. Statistical significance and predictive capacity were evaluated using internal and external validation. RESULTS: The most significant model has a correlation coefficient of 0.9334 (squared correlation coefficient r2 = 0.8713), showing that biological activity and descriptors have a strong relationship. The model exhibited internal predictivity of 74.45 percent (q2 = 0.2129), external predictivity of 81.09 percent (pred r2 = 0.8417), and the smallest error term for the predictive correlation coefficient (pred r2se = 0.1255). The model revealed steric (S 1047––0.0780––0.0451S 927) and electrostatic (E 1002) data points that contribute remarkably to anticancer activity. A molecular field study demonstrates a link between the structural features of substituted triazole derivatives and their activities. CONCLUSION: The good-to-moderate anticancer potential of compounds confirms the significant pharmacological role of 1,2,4-triazole derivatives. These results could lead to the identification of potential chemical compounds with optimal anticancer activity and minimal side effects. Elsevier 2023-12 2023-10-24 /pmc/articles/PMC10661185/ /pubmed/38028224 http://dx.doi.org/10.1016/j.jsps.2023.101836 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Desai, Shailaja P. Mohite, S.K. Alobid, Saad Saralaya, M.G. Patil, Ashwini S Das, Kuntal Almadani, Moneer E. Arif Hussain, Syed Hussain Alamer, Bader Abdulrahman Jibreel, Ebtesam Ibrahim Almoteer, Ali Mohammed Basheeruddin Asdaq, Syed 3D QSAR study on substituted 1, 2, 4 triazole derivatives as anticancer agents by kNN MFA approach |
title | 3D QSAR study on substituted 1, 2, 4 triazole derivatives as anticancer agents by kNN MFA approach |
title_full | 3D QSAR study on substituted 1, 2, 4 triazole derivatives as anticancer agents by kNN MFA approach |
title_fullStr | 3D QSAR study on substituted 1, 2, 4 triazole derivatives as anticancer agents by kNN MFA approach |
title_full_unstemmed | 3D QSAR study on substituted 1, 2, 4 triazole derivatives as anticancer agents by kNN MFA approach |
title_short | 3D QSAR study on substituted 1, 2, 4 triazole derivatives as anticancer agents by kNN MFA approach |
title_sort | 3d qsar study on substituted 1, 2, 4 triazole derivatives as anticancer agents by knn mfa approach |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10661185/ https://www.ncbi.nlm.nih.gov/pubmed/38028224 http://dx.doi.org/10.1016/j.jsps.2023.101836 |
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