Cargando…

Dataset of De novo leaf, salicylic induced leaf and flower transcriptome profiling of Datura metel plant

Datura metel L (thorn's apple) is a popular plant belonging to the family Solanaceae, growing all around the year in humid and warm climates. The importance of D. metel as a medicinal marvel is due to secondary metabolites within various parts of the plant, which serve different therapeutic fun...

Descripción completa

Detalles Bibliográficos
Autores principales: Hewadikaram, Madhavi, Bathige, S.D.N.K., Karunaratne, Veranja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10661695/
https://www.ncbi.nlm.nih.gov/pubmed/38020423
http://dx.doi.org/10.1016/j.dib.2023.109737
_version_ 1785138033683595264
author Hewadikaram, Madhavi
Bathige, S.D.N.K.
Karunaratne, Veranja
author_facet Hewadikaram, Madhavi
Bathige, S.D.N.K.
Karunaratne, Veranja
author_sort Hewadikaram, Madhavi
collection PubMed
description Datura metel L (thorn's apple) is a popular plant belonging to the family Solanaceae, growing all around the year in humid and warm climates. The importance of D. metel as a medicinal marvel is due to secondary metabolites within various parts of the plant, which serve different therapeutic functions. The whole plant is considered a narcotic, anodyne, and antispasmodic, while the leaves, bark, and seeds are also separately used in extractions. The biological potency of the plant has been used in traditional medicine for over a century. Currently, plant parts are used as a rich source in pharmaceutical manufacturing of secondary metabolites such as flavonoids, saponins, alkaloids, steroids, tannins, and withanaloids. D. metel has proven advanced functions of antiviral effects, antibacterial and antifungal effects, anti-inflammatory, analgesic, antipyretic, hepatoprotective, nephroprotective effect, anticancer, and to treat chronic cardiovascular diseases, diabetes, and neurological ailments. This is the first report on transcriptome assembly for this plant. The raw RNA sequencing data for leaf, salicylic-induced leaf, and flower are available at the NCBI Sequence Read Archive (SRA) under the Bioproject access PRJNA838784. The raw RNA sequencing data that is currently accessible can be utilized to conduct differential gene expression investigations pertaining to various secondary metabolite pathways and diverse tissues, as well as for the research of gene expression related to stress induced by salicylic acid in leaf tissues of the plant. Gene functions can be evaluated and mostly utilized for gene clustering data analysis, gene characterizations, and the identification of genes involved in linked biological pathways in plant studies.
format Online
Article
Text
id pubmed-10661695
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-106616952023-10-29 Dataset of De novo leaf, salicylic induced leaf and flower transcriptome profiling of Datura metel plant Hewadikaram, Madhavi Bathige, S.D.N.K. Karunaratne, Veranja Data Brief Data Article Datura metel L (thorn's apple) is a popular plant belonging to the family Solanaceae, growing all around the year in humid and warm climates. The importance of D. metel as a medicinal marvel is due to secondary metabolites within various parts of the plant, which serve different therapeutic functions. The whole plant is considered a narcotic, anodyne, and antispasmodic, while the leaves, bark, and seeds are also separately used in extractions. The biological potency of the plant has been used in traditional medicine for over a century. Currently, plant parts are used as a rich source in pharmaceutical manufacturing of secondary metabolites such as flavonoids, saponins, alkaloids, steroids, tannins, and withanaloids. D. metel has proven advanced functions of antiviral effects, antibacterial and antifungal effects, anti-inflammatory, analgesic, antipyretic, hepatoprotective, nephroprotective effect, anticancer, and to treat chronic cardiovascular diseases, diabetes, and neurological ailments. This is the first report on transcriptome assembly for this plant. The raw RNA sequencing data for leaf, salicylic-induced leaf, and flower are available at the NCBI Sequence Read Archive (SRA) under the Bioproject access PRJNA838784. The raw RNA sequencing data that is currently accessible can be utilized to conduct differential gene expression investigations pertaining to various secondary metabolite pathways and diverse tissues, as well as for the research of gene expression related to stress induced by salicylic acid in leaf tissues of the plant. Gene functions can be evaluated and mostly utilized for gene clustering data analysis, gene characterizations, and the identification of genes involved in linked biological pathways in plant studies. Elsevier 2023-10-29 /pmc/articles/PMC10661695/ /pubmed/38020423 http://dx.doi.org/10.1016/j.dib.2023.109737 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Hewadikaram, Madhavi
Bathige, S.D.N.K.
Karunaratne, Veranja
Dataset of De novo leaf, salicylic induced leaf and flower transcriptome profiling of Datura metel plant
title Dataset of De novo leaf, salicylic induced leaf and flower transcriptome profiling of Datura metel plant
title_full Dataset of De novo leaf, salicylic induced leaf and flower transcriptome profiling of Datura metel plant
title_fullStr Dataset of De novo leaf, salicylic induced leaf and flower transcriptome profiling of Datura metel plant
title_full_unstemmed Dataset of De novo leaf, salicylic induced leaf and flower transcriptome profiling of Datura metel plant
title_short Dataset of De novo leaf, salicylic induced leaf and flower transcriptome profiling of Datura metel plant
title_sort dataset of de novo leaf, salicylic induced leaf and flower transcriptome profiling of datura metel plant
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10661695/
https://www.ncbi.nlm.nih.gov/pubmed/38020423
http://dx.doi.org/10.1016/j.dib.2023.109737
work_keys_str_mv AT hewadikarammadhavi datasetofdenovoleafsalicylicinducedleafandflowertranscriptomeprofilingofdaturametelplant
AT bathigesdnk datasetofdenovoleafsalicylicinducedleafandflowertranscriptomeprofilingofdaturametelplant
AT karunaratneveranja datasetofdenovoleafsalicylicinducedleafandflowertranscriptomeprofilingofdaturametelplant