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Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples

The bioMérieux BIOFIRE Joint Infection (JI) Panel is a multiplex in vitro diagnostic test for the simultaneous and rapid (~1 h) detection of 39 potential pathogens and antimicrobial resistance (AMR) genes directly from synovial fluid (SF) samples. Thirty-one species or groups of microorganisms are i...

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Autores principales: Esteban, Jaime, Salar-Vidal, Llanos, Schmitt, Bryan H., Waggoner, Amy, Laurent, Frédéric, Abad, Lelia, Bauer, Thomas W., Mazariegos, Irving, Balada-Llasat, Joan-Miquel, Horn, Jared, Wolk, Donna M., Jefferis, Alexa, Hermans, Mirjam, Verhoofstad, Irma, Butler-Wu, Susan M., Umali-Wilcox, Minette, Murphy, Caitlin, Cabrera, Barbara, Craft, David, von Bredow, Benjamin, Leber, Amy, Everhart, Kathy, Dien Bard, Jennifer, Flores, Irvin Ibarra, Daly, Judy, Barr, Rebecca, Holmberg, Kristen, Graue, Corrin, Kensinger, Bart
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10662359/
https://www.ncbi.nlm.nih.gov/pubmed/37877730
http://dx.doi.org/10.1128/jcm.00357-23
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author Esteban, Jaime
Salar-Vidal, Llanos
Schmitt, Bryan H.
Waggoner, Amy
Laurent, Frédéric
Abad, Lelia
Bauer, Thomas W.
Mazariegos, Irving
Balada-Llasat, Joan-Miquel
Horn, Jared
Wolk, Donna M.
Jefferis, Alexa
Hermans, Mirjam
Verhoofstad, Irma
Butler-Wu, Susan M.
Umali-Wilcox, Minette
Murphy, Caitlin
Cabrera, Barbara
Craft, David
von Bredow, Benjamin
Leber, Amy
Everhart, Kathy
Dien Bard, Jennifer
Flores, Irvin Ibarra
Daly, Judy
Barr, Rebecca
Holmberg, Kristen
Graue, Corrin
Kensinger, Bart
author_facet Esteban, Jaime
Salar-Vidal, Llanos
Schmitt, Bryan H.
Waggoner, Amy
Laurent, Frédéric
Abad, Lelia
Bauer, Thomas W.
Mazariegos, Irving
Balada-Llasat, Joan-Miquel
Horn, Jared
Wolk, Donna M.
Jefferis, Alexa
Hermans, Mirjam
Verhoofstad, Irma
Butler-Wu, Susan M.
Umali-Wilcox, Minette
Murphy, Caitlin
Cabrera, Barbara
Craft, David
von Bredow, Benjamin
Leber, Amy
Everhart, Kathy
Dien Bard, Jennifer
Flores, Irvin Ibarra
Daly, Judy
Barr, Rebecca
Holmberg, Kristen
Graue, Corrin
Kensinger, Bart
author_sort Esteban, Jaime
collection PubMed
description The bioMérieux BIOFIRE Joint Infection (JI) Panel is a multiplex in vitro diagnostic test for the simultaneous and rapid (~1 h) detection of 39 potential pathogens and antimicrobial resistance (AMR) genes directly from synovial fluid (SF) samples. Thirty-one species or groups of microorganisms are included in the kit, as well as several AMR genes. This study, performed to evaluate the BIOFIRE JI Panel for regulatory clearance, provides data from a multicenter evaluation of 1,544 prospectively collected residual SF samples with performance compared to standard-of-care (SOC) culture for organisms or polymerase chain reaction (PCR) and sequencing for AMR genes. The BIOFIRE JI Panel demonstrated a sensitivity of 90.9% or greater for all but six organisms and a positive percent agreement (PPA) of 100% for all AMR genes. The BIOFIRE JI Panel demonstrated a specificity of 98.5% or greater for detection of all organisms and a negative percent agreement (NPA) of 95.7% or greater for all AMR genes. The BIOFIRE JI Panel provides an improvement over SOC culture, with a substantially shorter time to result for both organisms and AMR genes with excellent sensitivity/PPA and specificity/NPA, and is anticipated to provide timely and actionable diagnostic information for joint infections in a variety of clinical scenarios.
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spelling pubmed-106623592023-10-25 Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples Esteban, Jaime Salar-Vidal, Llanos Schmitt, Bryan H. Waggoner, Amy Laurent, Frédéric Abad, Lelia Bauer, Thomas W. Mazariegos, Irving Balada-Llasat, Joan-Miquel Horn, Jared Wolk, Donna M. Jefferis, Alexa Hermans, Mirjam Verhoofstad, Irma Butler-Wu, Susan M. Umali-Wilcox, Minette Murphy, Caitlin Cabrera, Barbara Craft, David von Bredow, Benjamin Leber, Amy Everhart, Kathy Dien Bard, Jennifer Flores, Irvin Ibarra Daly, Judy Barr, Rebecca Holmberg, Kristen Graue, Corrin Kensinger, Bart J Clin Microbiol Bacteriology The bioMérieux BIOFIRE Joint Infection (JI) Panel is a multiplex in vitro diagnostic test for the simultaneous and rapid (~1 h) detection of 39 potential pathogens and antimicrobial resistance (AMR) genes directly from synovial fluid (SF) samples. Thirty-one species or groups of microorganisms are included in the kit, as well as several AMR genes. This study, performed to evaluate the BIOFIRE JI Panel for regulatory clearance, provides data from a multicenter evaluation of 1,544 prospectively collected residual SF samples with performance compared to standard-of-care (SOC) culture for organisms or polymerase chain reaction (PCR) and sequencing for AMR genes. The BIOFIRE JI Panel demonstrated a sensitivity of 90.9% or greater for all but six organisms and a positive percent agreement (PPA) of 100% for all AMR genes. The BIOFIRE JI Panel demonstrated a specificity of 98.5% or greater for detection of all organisms and a negative percent agreement (NPA) of 95.7% or greater for all AMR genes. The BIOFIRE JI Panel provides an improvement over SOC culture, with a substantially shorter time to result for both organisms and AMR genes with excellent sensitivity/PPA and specificity/NPA, and is anticipated to provide timely and actionable diagnostic information for joint infections in a variety of clinical scenarios. American Society for Microbiology 2023-10-25 /pmc/articles/PMC10662359/ /pubmed/37877730 http://dx.doi.org/10.1128/jcm.00357-23 Text en Copyright © 2023 Esteban et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Bacteriology
Esteban, Jaime
Salar-Vidal, Llanos
Schmitt, Bryan H.
Waggoner, Amy
Laurent, Frédéric
Abad, Lelia
Bauer, Thomas W.
Mazariegos, Irving
Balada-Llasat, Joan-Miquel
Horn, Jared
Wolk, Donna M.
Jefferis, Alexa
Hermans, Mirjam
Verhoofstad, Irma
Butler-Wu, Susan M.
Umali-Wilcox, Minette
Murphy, Caitlin
Cabrera, Barbara
Craft, David
von Bredow, Benjamin
Leber, Amy
Everhart, Kathy
Dien Bard, Jennifer
Flores, Irvin Ibarra
Daly, Judy
Barr, Rebecca
Holmberg, Kristen
Graue, Corrin
Kensinger, Bart
Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples
title Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples
title_full Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples
title_fullStr Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples
title_full_unstemmed Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples
title_short Multicenter evaluation of the BIOFIRE Joint Infection Panel for the detection of bacteria, yeast, and AMR genes in synovial fluid samples
title_sort multicenter evaluation of the biofire joint infection panel for the detection of bacteria, yeast, and amr genes in synovial fluid samples
topic Bacteriology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10662359/
https://www.ncbi.nlm.nih.gov/pubmed/37877730
http://dx.doi.org/10.1128/jcm.00357-23
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