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Radiogenomic Analysis of Vascular Endothelial Growth Factor in Patients With Glioblastoma

OBJECTIVES: This article aims to predict the presence of vascular endothelial growth factor (VEGF) expression and to predict the expression level of VEGF by machine learning based on preoperative magnetic resonance imaging (MRI) of glioblastoma (GBM). METHODS: We analyzed the axial T2-weighted image...

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Autores principales: Zheng, Fei, Chen, Baoshi, Zhang, Lingling, Chen, Hongyan, Zang, Yuying, Chen, Xuzhu, Li, Yiming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10662586/
https://www.ncbi.nlm.nih.gov/pubmed/37948373
http://dx.doi.org/10.1097/RCT.0000000000001510
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author Zheng, Fei
Chen, Baoshi
Zhang, Lingling
Chen, Hongyan
Zang, Yuying
Chen, Xuzhu
Li, Yiming
author_facet Zheng, Fei
Chen, Baoshi
Zhang, Lingling
Chen, Hongyan
Zang, Yuying
Chen, Xuzhu
Li, Yiming
author_sort Zheng, Fei
collection PubMed
description OBJECTIVES: This article aims to predict the presence of vascular endothelial growth factor (VEGF) expression and to predict the expression level of VEGF by machine learning based on preoperative magnetic resonance imaging (MRI) of glioblastoma (GBM). METHODS: We analyzed the axial T2-weighted images (T2WI) and T1-weighted contrast-enhancement images of preoperative MRI in 217 patients with pathologically diagnosed GBM. Patients were divided into negative and positive VEGF groups, with the latter group further subdivided into low and high expression. The machine learning models were established with the maximum relevance and minimum redundancy algorithm and the extreme gradient boosting classifier. The area under the receiver operating curve (AUC) and accuracy were calculated for the training and validation sets. RESULTS: Positive VEGF in GBM was 63.1% (137/217), with a high expression ratio of 53.3% (73/137). To predict the positive and negative VEGF expression, 7 radiomic features were selected, with 3 features from T1CE and 4 from T2WI. The accuracy and AUC were 0.83 and 0.81, respectively, in the training set and were 0.73 and 0.74, respectively, in the validation set. To predict high and low levels, 7 radiomic features were selected, with 2 from T1CE, 1 from T2WI, and 4 from the data combinations of T1CE and T2WI. The accuracy and AUC were 0.88 and 0.88, respectively, in the training set and were 0.72 and 0.72, respectively, in the validation set. CONCLUSION: The VEGF expression status in GBM can be predicted using a machine learning model. Radiomic features resulting from data combinations of different MRI sequences could be helpful.
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spelling pubmed-106625862023-11-21 Radiogenomic Analysis of Vascular Endothelial Growth Factor in Patients With Glioblastoma Zheng, Fei Chen, Baoshi Zhang, Lingling Chen, Hongyan Zang, Yuying Chen, Xuzhu Li, Yiming J Comput Assist Tomogr Neuroimaging: Brain OBJECTIVES: This article aims to predict the presence of vascular endothelial growth factor (VEGF) expression and to predict the expression level of VEGF by machine learning based on preoperative magnetic resonance imaging (MRI) of glioblastoma (GBM). METHODS: We analyzed the axial T2-weighted images (T2WI) and T1-weighted contrast-enhancement images of preoperative MRI in 217 patients with pathologically diagnosed GBM. Patients were divided into negative and positive VEGF groups, with the latter group further subdivided into low and high expression. The machine learning models were established with the maximum relevance and minimum redundancy algorithm and the extreme gradient boosting classifier. The area under the receiver operating curve (AUC) and accuracy were calculated for the training and validation sets. RESULTS: Positive VEGF in GBM was 63.1% (137/217), with a high expression ratio of 53.3% (73/137). To predict the positive and negative VEGF expression, 7 radiomic features were selected, with 3 features from T1CE and 4 from T2WI. The accuracy and AUC were 0.83 and 0.81, respectively, in the training set and were 0.73 and 0.74, respectively, in the validation set. To predict high and low levels, 7 radiomic features were selected, with 2 from T1CE, 1 from T2WI, and 4 from the data combinations of T1CE and T2WI. The accuracy and AUC were 0.88 and 0.88, respectively, in the training set and were 0.72 and 0.72, respectively, in the validation set. CONCLUSION: The VEGF expression status in GBM can be predicted using a machine learning model. Radiomic features resulting from data combinations of different MRI sequences could be helpful. Lippincott Williams & Wilkins 2023 2023-07-28 /pmc/articles/PMC10662586/ /pubmed/37948373 http://dx.doi.org/10.1097/RCT.0000000000001510 Text en Copyright © 2023 The Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) , where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal.
spellingShingle Neuroimaging: Brain
Zheng, Fei
Chen, Baoshi
Zhang, Lingling
Chen, Hongyan
Zang, Yuying
Chen, Xuzhu
Li, Yiming
Radiogenomic Analysis of Vascular Endothelial Growth Factor in Patients With Glioblastoma
title Radiogenomic Analysis of Vascular Endothelial Growth Factor in Patients With Glioblastoma
title_full Radiogenomic Analysis of Vascular Endothelial Growth Factor in Patients With Glioblastoma
title_fullStr Radiogenomic Analysis of Vascular Endothelial Growth Factor in Patients With Glioblastoma
title_full_unstemmed Radiogenomic Analysis of Vascular Endothelial Growth Factor in Patients With Glioblastoma
title_short Radiogenomic Analysis of Vascular Endothelial Growth Factor in Patients With Glioblastoma
title_sort radiogenomic analysis of vascular endothelial growth factor in patients with glioblastoma
topic Neuroimaging: Brain
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10662586/
https://www.ncbi.nlm.nih.gov/pubmed/37948373
http://dx.doi.org/10.1097/RCT.0000000000001510
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