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Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography
Full quantification of Positron Emission Tomography (PET) requires an arterial input function (AIF) for measurement of certain targets, or using particular radiotracers, or for the quantification of specific outcome measures. The AIF represents the measurement of radiotracer concentrations in the ar...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663416/ https://www.ncbi.nlm.nih.gov/pubmed/37987874 http://dx.doi.org/10.1186/s40658-023-00591-2 |
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author | Matheson, Granville J. Ge, Liner Zhang, Mengyu Sun, Bingyu Tu, Yuqi Zanderigo, Francesca Forsberg Morèn, Anton Ogden, R. Todd |
author_facet | Matheson, Granville J. Ge, Liner Zhang, Mengyu Sun, Bingyu Tu, Yuqi Zanderigo, Francesca Forsberg Morèn, Anton Ogden, R. Todd |
author_sort | Matheson, Granville J. |
collection | PubMed |
description | Full quantification of Positron Emission Tomography (PET) requires an arterial input function (AIF) for measurement of certain targets, or using particular radiotracers, or for the quantification of specific outcome measures. The AIF represents the measurement of radiotracer concentrations in the arterial blood plasma over the course of the PET examination. Measurement of the AIF is prone to error as it is a composite measure created from the combination of multiple measurements of different samples with different equipment, each of which can be sources of measurement error. Moreover, its measurement requires a high degree of temporal granularity for early time points, which necessitates a compromise between quality and quantity of recorded samples. For these reasons, it is often desirable to fit models to this data in order to improve its quality before using it for quantification of radiotracer binding in the tissue. The raw observations of radioactivity in arterial blood and plasma samples are derived from radioactive decay, which is measured as a number of recorded counts. Count data have several specific properties, including the fact that they cannot be negative as well as a particular mean-variance relationship. Poisson regression is the most principled modelling strategy for working with count data, as it both incorporates and exploits these properties. However, no previous studies to our knowledge have taken this approach, despite the advantages of greater efficiency and accuracy which result from using the appropriate distributional assumptions. Here, we implement a Poisson regression modelling approach for the AIF as proof-of-concept of its application. We applied both parametric and non-parametric models for the input function curve. We show that a negative binomial distribution is a more appropriate error distribution for handling overdispersion. Furthermore, we extend this approach to a hierarchical non-parametric model which is shown to be highly resilient to missing data. We thus demonstrate that Poisson regression is both feasible and effective when applied to AIF data, and propose that this is a promising strategy for modelling blood count data for PET in future. |
format | Online Article Text |
id | pubmed-10663416 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-106634162023-11-21 Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography Matheson, Granville J. Ge, Liner Zhang, Mengyu Sun, Bingyu Tu, Yuqi Zanderigo, Francesca Forsberg Morèn, Anton Ogden, R. Todd EJNMMI Phys Original Research Full quantification of Positron Emission Tomography (PET) requires an arterial input function (AIF) for measurement of certain targets, or using particular radiotracers, or for the quantification of specific outcome measures. The AIF represents the measurement of radiotracer concentrations in the arterial blood plasma over the course of the PET examination. Measurement of the AIF is prone to error as it is a composite measure created from the combination of multiple measurements of different samples with different equipment, each of which can be sources of measurement error. Moreover, its measurement requires a high degree of temporal granularity for early time points, which necessitates a compromise between quality and quantity of recorded samples. For these reasons, it is often desirable to fit models to this data in order to improve its quality before using it for quantification of radiotracer binding in the tissue. The raw observations of radioactivity in arterial blood and plasma samples are derived from radioactive decay, which is measured as a number of recorded counts. Count data have several specific properties, including the fact that they cannot be negative as well as a particular mean-variance relationship. Poisson regression is the most principled modelling strategy for working with count data, as it both incorporates and exploits these properties. However, no previous studies to our knowledge have taken this approach, despite the advantages of greater efficiency and accuracy which result from using the appropriate distributional assumptions. Here, we implement a Poisson regression modelling approach for the AIF as proof-of-concept of its application. We applied both parametric and non-parametric models for the input function curve. We show that a negative binomial distribution is a more appropriate error distribution for handling overdispersion. Furthermore, we extend this approach to a hierarchical non-parametric model which is shown to be highly resilient to missing data. We thus demonstrate that Poisson regression is both feasible and effective when applied to AIF data, and propose that this is a promising strategy for modelling blood count data for PET in future. Springer International Publishing 2023-11-21 /pmc/articles/PMC10663416/ /pubmed/37987874 http://dx.doi.org/10.1186/s40658-023-00591-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Research Matheson, Granville J. Ge, Liner Zhang, Mengyu Sun, Bingyu Tu, Yuqi Zanderigo, Francesca Forsberg Morèn, Anton Ogden, R. Todd Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography |
title | Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography |
title_full | Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography |
title_fullStr | Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography |
title_full_unstemmed | Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography |
title_short | Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography |
title_sort | parametric and non-parametric poisson regression for modelling of the arterial input function in positron emission tomography |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663416/ https://www.ncbi.nlm.nih.gov/pubmed/37987874 http://dx.doi.org/10.1186/s40658-023-00591-2 |
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