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The D-Mercator method for the multidimensional hyperbolic embedding of real networks
One of the pillars of the geometric approach to networks has been the development of model-based mapping tools that embed real networks in its latent geometry. In particular, the tool Mercator embeds networks into the hyperbolic plane. However, some real networks are better described by the multidim...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663512/ https://www.ncbi.nlm.nih.gov/pubmed/37990019 http://dx.doi.org/10.1038/s41467-023-43337-5 |
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author | Jankowski, Robert Allard, Antoine Boguñá, Marián Serrano, M. Ángeles |
author_facet | Jankowski, Robert Allard, Antoine Boguñá, Marián Serrano, M. Ángeles |
author_sort | Jankowski, Robert |
collection | PubMed |
description | One of the pillars of the geometric approach to networks has been the development of model-based mapping tools that embed real networks in its latent geometry. In particular, the tool Mercator embeds networks into the hyperbolic plane. However, some real networks are better described by the multidimensional formulation of the underlying geometric model. Here, we introduce D-Mercator, a model-based embedding method that produces multidimensional maps of real networks into the (D + 1)-hyperbolic space, where the similarity subspace is represented as a D-sphere. We used D-Mercator to produce multidimensional hyperbolic maps of real networks and estimated their intrinsic dimensionality in terms of navigability and community structure. Multidimensional representations of real networks are instrumental in the identification of factors that determine connectivity and in elucidating fundamental issues that hinge on dimensionality, such as the presence of universality in critical behavior. |
format | Online Article Text |
id | pubmed-10663512 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106635122023-11-21 The D-Mercator method for the multidimensional hyperbolic embedding of real networks Jankowski, Robert Allard, Antoine Boguñá, Marián Serrano, M. Ángeles Nat Commun Article One of the pillars of the geometric approach to networks has been the development of model-based mapping tools that embed real networks in its latent geometry. In particular, the tool Mercator embeds networks into the hyperbolic plane. However, some real networks are better described by the multidimensional formulation of the underlying geometric model. Here, we introduce D-Mercator, a model-based embedding method that produces multidimensional maps of real networks into the (D + 1)-hyperbolic space, where the similarity subspace is represented as a D-sphere. We used D-Mercator to produce multidimensional hyperbolic maps of real networks and estimated their intrinsic dimensionality in terms of navigability and community structure. Multidimensional representations of real networks are instrumental in the identification of factors that determine connectivity and in elucidating fundamental issues that hinge on dimensionality, such as the presence of universality in critical behavior. Nature Publishing Group UK 2023-11-21 /pmc/articles/PMC10663512/ /pubmed/37990019 http://dx.doi.org/10.1038/s41467-023-43337-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Jankowski, Robert Allard, Antoine Boguñá, Marián Serrano, M. Ángeles The D-Mercator method for the multidimensional hyperbolic embedding of real networks |
title | The D-Mercator method for the multidimensional hyperbolic embedding of real networks |
title_full | The D-Mercator method for the multidimensional hyperbolic embedding of real networks |
title_fullStr | The D-Mercator method for the multidimensional hyperbolic embedding of real networks |
title_full_unstemmed | The D-Mercator method for the multidimensional hyperbolic embedding of real networks |
title_short | The D-Mercator method for the multidimensional hyperbolic embedding of real networks |
title_sort | d-mercator method for the multidimensional hyperbolic embedding of real networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663512/ https://www.ncbi.nlm.nih.gov/pubmed/37990019 http://dx.doi.org/10.1038/s41467-023-43337-5 |
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