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IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer

Immunotherapy has dramatically changed the landscape of treatment for colorectal cancer (CRC), but currently lack of effective predictive biomarker, especially for tumors with mismatch repair (MMR) proficiency. The response of immunotherapy is associated with the cell–cell interactions in tumor micr...

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Autores principales: Rong, Yu-ming, Xu, Yu-cheng, Chen, Xiao-chuan, Zhong, Min-er, Tan, Ying-xin, Liang, Yu-fan, Weng, Jing-rong, Liu, Jun, Wang, Xin-you, Luo, Dan-dong, Bie, Yi-ran, Chen, Xi, Cai, Jia-wei, Yu, Zhao-liang, Zou, Yi-feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663589/
https://www.ncbi.nlm.nih.gov/pubmed/37989761
http://dx.doi.org/10.1038/s41598-023-47739-9
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author Rong, Yu-ming
Xu, Yu-cheng
Chen, Xiao-chuan
Zhong, Min-er
Tan, Ying-xin
Liang, Yu-fan
Weng, Jing-rong
Liu, Jun
Wang, Xin-you
Luo, Dan-dong
Bie, Yi-ran
Chen, Xi
Cai, Jia-wei
Yu, Zhao-liang
Zou, Yi-feng
author_facet Rong, Yu-ming
Xu, Yu-cheng
Chen, Xiao-chuan
Zhong, Min-er
Tan, Ying-xin
Liang, Yu-fan
Weng, Jing-rong
Liu, Jun
Wang, Xin-you
Luo, Dan-dong
Bie, Yi-ran
Chen, Xi
Cai, Jia-wei
Yu, Zhao-liang
Zou, Yi-feng
author_sort Rong, Yu-ming
collection PubMed
description Immunotherapy has dramatically changed the landscape of treatment for colorectal cancer (CRC), but currently lack of effective predictive biomarker, especially for tumors with mismatch repair (MMR) proficiency. The response of immunotherapy is associated with the cell–cell interactions in tumor microenvironment, encompassing processes such as cell–cell recognition, binding, and adhesion. However, the function of immunoglobulin superfamily (IGSF) genes in tumor immune microenvironment remains uncharacterized. This study quantified the immune landscape by leveraging a gene expression matrix from publicly accessible databases. The associations between IGSF6 gene expression and immune cell infiltration were assessed. The expression levels of IGSF6, CD8+ T cells, CD4+ T cells and CD68+ macrophage cells in cancer tissues from CRC patients and CRC cell lines were evaluated. IGSF6 was more highly expressed in CRC tumor tissues than adjacent normal tissues. And IGSF6 was significantly correlated with immune cell infiltration in MMR-proficient patients. Remarkably, MMR-proficient patients with high IGSF6 expression showed more sensitive to immunotherapy and chemotherapy than those with low IGSF6 expression. In summary, IGSF6 could be a novel biomarker to evaluate immune infiltration and predict therapeutic effect for MMR-proficient CRC.
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spelling pubmed-106635892023-11-21 IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer Rong, Yu-ming Xu, Yu-cheng Chen, Xiao-chuan Zhong, Min-er Tan, Ying-xin Liang, Yu-fan Weng, Jing-rong Liu, Jun Wang, Xin-you Luo, Dan-dong Bie, Yi-ran Chen, Xi Cai, Jia-wei Yu, Zhao-liang Zou, Yi-feng Sci Rep Article Immunotherapy has dramatically changed the landscape of treatment for colorectal cancer (CRC), but currently lack of effective predictive biomarker, especially for tumors with mismatch repair (MMR) proficiency. The response of immunotherapy is associated with the cell–cell interactions in tumor microenvironment, encompassing processes such as cell–cell recognition, binding, and adhesion. However, the function of immunoglobulin superfamily (IGSF) genes in tumor immune microenvironment remains uncharacterized. This study quantified the immune landscape by leveraging a gene expression matrix from publicly accessible databases. The associations between IGSF6 gene expression and immune cell infiltration were assessed. The expression levels of IGSF6, CD8+ T cells, CD4+ T cells and CD68+ macrophage cells in cancer tissues from CRC patients and CRC cell lines were evaluated. IGSF6 was more highly expressed in CRC tumor tissues than adjacent normal tissues. And IGSF6 was significantly correlated with immune cell infiltration in MMR-proficient patients. Remarkably, MMR-proficient patients with high IGSF6 expression showed more sensitive to immunotherapy and chemotherapy than those with low IGSF6 expression. In summary, IGSF6 could be a novel biomarker to evaluate immune infiltration and predict therapeutic effect for MMR-proficient CRC. Nature Publishing Group UK 2023-11-21 /pmc/articles/PMC10663589/ /pubmed/37989761 http://dx.doi.org/10.1038/s41598-023-47739-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Rong, Yu-ming
Xu, Yu-cheng
Chen, Xiao-chuan
Zhong, Min-er
Tan, Ying-xin
Liang, Yu-fan
Weng, Jing-rong
Liu, Jun
Wang, Xin-you
Luo, Dan-dong
Bie, Yi-ran
Chen, Xi
Cai, Jia-wei
Yu, Zhao-liang
Zou, Yi-feng
IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer
title IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer
title_full IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer
title_fullStr IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer
title_full_unstemmed IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer
title_short IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer
title_sort igsf6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663589/
https://www.ncbi.nlm.nih.gov/pubmed/37989761
http://dx.doi.org/10.1038/s41598-023-47739-9
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