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IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer
Immunotherapy has dramatically changed the landscape of treatment for colorectal cancer (CRC), but currently lack of effective predictive biomarker, especially for tumors with mismatch repair (MMR) proficiency. The response of immunotherapy is associated with the cell–cell interactions in tumor micr...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663589/ https://www.ncbi.nlm.nih.gov/pubmed/37989761 http://dx.doi.org/10.1038/s41598-023-47739-9 |
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author | Rong, Yu-ming Xu, Yu-cheng Chen, Xiao-chuan Zhong, Min-er Tan, Ying-xin Liang, Yu-fan Weng, Jing-rong Liu, Jun Wang, Xin-you Luo, Dan-dong Bie, Yi-ran Chen, Xi Cai, Jia-wei Yu, Zhao-liang Zou, Yi-feng |
author_facet | Rong, Yu-ming Xu, Yu-cheng Chen, Xiao-chuan Zhong, Min-er Tan, Ying-xin Liang, Yu-fan Weng, Jing-rong Liu, Jun Wang, Xin-you Luo, Dan-dong Bie, Yi-ran Chen, Xi Cai, Jia-wei Yu, Zhao-liang Zou, Yi-feng |
author_sort | Rong, Yu-ming |
collection | PubMed |
description | Immunotherapy has dramatically changed the landscape of treatment for colorectal cancer (CRC), but currently lack of effective predictive biomarker, especially for tumors with mismatch repair (MMR) proficiency. The response of immunotherapy is associated with the cell–cell interactions in tumor microenvironment, encompassing processes such as cell–cell recognition, binding, and adhesion. However, the function of immunoglobulin superfamily (IGSF) genes in tumor immune microenvironment remains uncharacterized. This study quantified the immune landscape by leveraging a gene expression matrix from publicly accessible databases. The associations between IGSF6 gene expression and immune cell infiltration were assessed. The expression levels of IGSF6, CD8+ T cells, CD4+ T cells and CD68+ macrophage cells in cancer tissues from CRC patients and CRC cell lines were evaluated. IGSF6 was more highly expressed in CRC tumor tissues than adjacent normal tissues. And IGSF6 was significantly correlated with immune cell infiltration in MMR-proficient patients. Remarkably, MMR-proficient patients with high IGSF6 expression showed more sensitive to immunotherapy and chemotherapy than those with low IGSF6 expression. In summary, IGSF6 could be a novel biomarker to evaluate immune infiltration and predict therapeutic effect for MMR-proficient CRC. |
format | Online Article Text |
id | pubmed-10663589 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106635892023-11-21 IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer Rong, Yu-ming Xu, Yu-cheng Chen, Xiao-chuan Zhong, Min-er Tan, Ying-xin Liang, Yu-fan Weng, Jing-rong Liu, Jun Wang, Xin-you Luo, Dan-dong Bie, Yi-ran Chen, Xi Cai, Jia-wei Yu, Zhao-liang Zou, Yi-feng Sci Rep Article Immunotherapy has dramatically changed the landscape of treatment for colorectal cancer (CRC), but currently lack of effective predictive biomarker, especially for tumors with mismatch repair (MMR) proficiency. The response of immunotherapy is associated with the cell–cell interactions in tumor microenvironment, encompassing processes such as cell–cell recognition, binding, and adhesion. However, the function of immunoglobulin superfamily (IGSF) genes in tumor immune microenvironment remains uncharacterized. This study quantified the immune landscape by leveraging a gene expression matrix from publicly accessible databases. The associations between IGSF6 gene expression and immune cell infiltration were assessed. The expression levels of IGSF6, CD8+ T cells, CD4+ T cells and CD68+ macrophage cells in cancer tissues from CRC patients and CRC cell lines were evaluated. IGSF6 was more highly expressed in CRC tumor tissues than adjacent normal tissues. And IGSF6 was significantly correlated with immune cell infiltration in MMR-proficient patients. Remarkably, MMR-proficient patients with high IGSF6 expression showed more sensitive to immunotherapy and chemotherapy than those with low IGSF6 expression. In summary, IGSF6 could be a novel biomarker to evaluate immune infiltration and predict therapeutic effect for MMR-proficient CRC. Nature Publishing Group UK 2023-11-21 /pmc/articles/PMC10663589/ /pubmed/37989761 http://dx.doi.org/10.1038/s41598-023-47739-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Rong, Yu-ming Xu, Yu-cheng Chen, Xiao-chuan Zhong, Min-er Tan, Ying-xin Liang, Yu-fan Weng, Jing-rong Liu, Jun Wang, Xin-you Luo, Dan-dong Bie, Yi-ran Chen, Xi Cai, Jia-wei Yu, Zhao-liang Zou, Yi-feng IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer |
title | IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer |
title_full | IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer |
title_fullStr | IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer |
title_full_unstemmed | IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer |
title_short | IGSF6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer |
title_sort | igsf6 is a novel biomarker to evaluate immune infiltration in mismatch repair-proficient colorectal cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663589/ https://www.ncbi.nlm.nih.gov/pubmed/37989761 http://dx.doi.org/10.1038/s41598-023-47739-9 |
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