Cargando…
Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov
The deep sea harbours microorganisms with unique life characteristics and activities due to adaptation to particular environmental conditions, but the limited sample collection and pure culture techniques available constrain the study of deep-sea microorganisms. In this study, strain Ant34-E75 was i...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663628/ https://www.ncbi.nlm.nih.gov/pubmed/37990058 http://dx.doi.org/10.1038/s42003-023-05559-7 |
_version_ | 1785148677486018560 |
---|---|
author | Liu, Wenqi Cong, Bailin Lin, Jing Liu, Shenghao Deng, Aifang Zhao, Linlin |
author_facet | Liu, Wenqi Cong, Bailin Lin, Jing Liu, Shenghao Deng, Aifang Zhao, Linlin |
author_sort | Liu, Wenqi |
collection | PubMed |
description | The deep sea harbours microorganisms with unique life characteristics and activities due to adaptation to particular environmental conditions, but the limited sample collection and pure culture techniques available constrain the study of deep-sea microorganisms. In this study, strain Ant34-E75 was isolated from Antarctic deep-sea sediment samples and showed the highest 16 S rRNA gene sequence similarity (97.18%) with the strain Aequorivita viscosa 8-1b(T). Strain Ant34-E75 is psychrotrophic and can effectively increase the cold tolerance of Chlamydomonas reinhardtii (a model organism). Subsequent transcriptome analysis revealed multiple mechanisms involved in the Ant34-E75 response to temperature stress, and weighted gene co-expression network analysis (WGCNA) showed that the peptidoglycan synthesis pathway was the key component. Overall, this study provides insights into the characteristics of a deep-sea microorganism and elucidates mechanisms of temperature adaptation at the molecular level. |
format | Online Article Text |
id | pubmed-10663628 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106636282023-11-21 Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov Liu, Wenqi Cong, Bailin Lin, Jing Liu, Shenghao Deng, Aifang Zhao, Linlin Commun Biol Article The deep sea harbours microorganisms with unique life characteristics and activities due to adaptation to particular environmental conditions, but the limited sample collection and pure culture techniques available constrain the study of deep-sea microorganisms. In this study, strain Ant34-E75 was isolated from Antarctic deep-sea sediment samples and showed the highest 16 S rRNA gene sequence similarity (97.18%) with the strain Aequorivita viscosa 8-1b(T). Strain Ant34-E75 is psychrotrophic and can effectively increase the cold tolerance of Chlamydomonas reinhardtii (a model organism). Subsequent transcriptome analysis revealed multiple mechanisms involved in the Ant34-E75 response to temperature stress, and weighted gene co-expression network analysis (WGCNA) showed that the peptidoglycan synthesis pathway was the key component. Overall, this study provides insights into the characteristics of a deep-sea microorganism and elucidates mechanisms of temperature adaptation at the molecular level. Nature Publishing Group UK 2023-11-21 /pmc/articles/PMC10663628/ /pubmed/37990058 http://dx.doi.org/10.1038/s42003-023-05559-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Liu, Wenqi Cong, Bailin Lin, Jing Liu, Shenghao Deng, Aifang Zhao, Linlin Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov |
title | Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov |
title_full | Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov |
title_fullStr | Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov |
title_full_unstemmed | Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov |
title_short | Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov |
title_sort | taxonomic identification and temperature stress tolerance mechanisms of aequorivita marisscotiae sp. nov |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10663628/ https://www.ncbi.nlm.nih.gov/pubmed/37990058 http://dx.doi.org/10.1038/s42003-023-05559-7 |
work_keys_str_mv | AT liuwenqi taxonomicidentificationandtemperaturestresstolerancemechanismsofaequorivitamarisscotiaespnov AT congbailin taxonomicidentificationandtemperaturestresstolerancemechanismsofaequorivitamarisscotiaespnov AT linjing taxonomicidentificationandtemperaturestresstolerancemechanismsofaequorivitamarisscotiaespnov AT liushenghao taxonomicidentificationandtemperaturestresstolerancemechanismsofaequorivitamarisscotiaespnov AT dengaifang taxonomicidentificationandtemperaturestresstolerancemechanismsofaequorivitamarisscotiaespnov AT zhaolinlin taxonomicidentificationandtemperaturestresstolerancemechanismsofaequorivitamarisscotiaespnov |