Cargando…
Similar hypothyroid and sepsis circulating mRNA expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study
OBJECTIVE: Based on hypothetical hypothyroidism and nonthyroidal illness syndrome (NTIS) gene expression similarities, we decided to compare the patterns of expression of both as models of NTIS. The concordant profile between them may enlighten new biomarkers for NTIS challenging scenarios. MATERIAL...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Endocrinologia e Metabologia
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10665055/ https://www.ncbi.nlm.nih.gov/pubmed/37249456 http://dx.doi.org/10.20945/2359-3997000000625 |
_version_ | 1785138746023215104 |
---|---|
author | de Almeida, Robson José Hirata, Andréa Harumy de Lima Rocha, Luiz Antônio de Jesus Motta, Miriam Duarte de Arruda Varela, Patricia Martins, Leonardo Pesquero, João Bosco Camacho, Cléber P. |
author_facet | de Almeida, Robson José Hirata, Andréa Harumy de Lima Rocha, Luiz Antônio de Jesus Motta, Miriam Duarte de Arruda Varela, Patricia Martins, Leonardo Pesquero, João Bosco Camacho, Cléber P. |
author_sort | de Almeida, Robson José |
collection | PubMed |
description | OBJECTIVE: Based on hypothetical hypothyroidism and nonthyroidal illness syndrome (NTIS) gene expression similarities, we decided to compare the patterns of expression of both as models of NTIS. The concordant profile between them may enlighten new biomarkers for NTIS challenging scenarios. MATERIALS AND METHODS: We used Ion Proton System next-generation sequencing to build the hypothyroidism transcriptome. We selected two databanks in GEO2 platform datasets to find the differentially expressed genes (DEGs) in adults and children with sepsis. The ROC curve was constructed to calculate the area under the curve (AUC). The AUC, chi-square, sensitivity, specificity, accuracy, kappa and likelihood were calculated. We performed Cox regression and Kaplan-Meier analyses for the survival analysis. RESULTS: Concerning hypothyroidism DEGs, 70.42% were shared with sepsis survivors and 61.94% with sepsis nonsurvivors. Some of them were mitochondrial gene types (mitGenes), and 95 and 88 were related to sepsis survivors and nonsurvivors, respectively. BLOC1S1, ROMO1, SLIRP and TIMM8B mitGenes showed the capability to distinguish sepsis survivors and nonsurvivors. CONCLUSION: We matched our hypothyroidism DEGs with those in adults and children with sepsis. Additionally, we observed different patterns of hypothyroid-related genes among sepsis survivors and nonsurvivors. Finally, we demonstrated that ROMO1, SLIRP and TIMM8B could be predictive biomarkers in children's sepsis. |
format | Online Article Text |
id | pubmed-10665055 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Sociedade Brasileira de Endocrinologia e Metabologia |
record_format | MEDLINE/PubMed |
spelling | pubmed-106650552023-05-29 Similar hypothyroid and sepsis circulating mRNA expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study de Almeida, Robson José Hirata, Andréa Harumy de Lima Rocha, Luiz Antônio de Jesus Motta, Miriam Duarte de Arruda Varela, Patricia Martins, Leonardo Pesquero, João Bosco Camacho, Cléber P. Arch Endocrinol Metab Original Article OBJECTIVE: Based on hypothetical hypothyroidism and nonthyroidal illness syndrome (NTIS) gene expression similarities, we decided to compare the patterns of expression of both as models of NTIS. The concordant profile between them may enlighten new biomarkers for NTIS challenging scenarios. MATERIALS AND METHODS: We used Ion Proton System next-generation sequencing to build the hypothyroidism transcriptome. We selected two databanks in GEO2 platform datasets to find the differentially expressed genes (DEGs) in adults and children with sepsis. The ROC curve was constructed to calculate the area under the curve (AUC). The AUC, chi-square, sensitivity, specificity, accuracy, kappa and likelihood were calculated. We performed Cox regression and Kaplan-Meier analyses for the survival analysis. RESULTS: Concerning hypothyroidism DEGs, 70.42% were shared with sepsis survivors and 61.94% with sepsis nonsurvivors. Some of them were mitochondrial gene types (mitGenes), and 95 and 88 were related to sepsis survivors and nonsurvivors, respectively. BLOC1S1, ROMO1, SLIRP and TIMM8B mitGenes showed the capability to distinguish sepsis survivors and nonsurvivors. CONCLUSION: We matched our hypothyroidism DEGs with those in adults and children with sepsis. Additionally, we observed different patterns of hypothyroid-related genes among sepsis survivors and nonsurvivors. Finally, we demonstrated that ROMO1, SLIRP and TIMM8B could be predictive biomarkers in children's sepsis. Sociedade Brasileira de Endocrinologia e Metabologia 2023-05-29 /pmc/articles/PMC10665055/ /pubmed/37249456 http://dx.doi.org/10.20945/2359-3997000000625 Text en https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article de Almeida, Robson José Hirata, Andréa Harumy de Lima Rocha, Luiz Antônio de Jesus Motta, Miriam Duarte de Arruda Varela, Patricia Martins, Leonardo Pesquero, João Bosco Camacho, Cléber P. Similar hypothyroid and sepsis circulating mRNA expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study |
title | Similar hypothyroid and sepsis circulating mRNA expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study |
title_full | Similar hypothyroid and sepsis circulating mRNA expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study |
title_fullStr | Similar hypothyroid and sepsis circulating mRNA expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study |
title_full_unstemmed | Similar hypothyroid and sepsis circulating mRNA expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study |
title_short | Similar hypothyroid and sepsis circulating mRNA expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study |
title_sort | similar hypothyroid and sepsis circulating mrna expression could be useful as a biomarker in nonthyroidal illness syndrome: a pilot study |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10665055/ https://www.ncbi.nlm.nih.gov/pubmed/37249456 http://dx.doi.org/10.20945/2359-3997000000625 |
work_keys_str_mv | AT dealmeidarobsonjose similarhypothyroidandsepsiscirculatingmrnaexpressioncouldbeusefulasabiomarkerinnonthyroidalillnesssyndromeapilotstudy AT hirataandreaharumydelima similarhypothyroidandsepsiscirculatingmrnaexpressioncouldbeusefulasabiomarkerinnonthyroidalillnesssyndromeapilotstudy AT rochaluizantoniodejesus similarhypothyroidandsepsiscirculatingmrnaexpressioncouldbeusefulasabiomarkerinnonthyroidalillnesssyndromeapilotstudy AT mottamiriamduartedearruda similarhypothyroidandsepsiscirculatingmrnaexpressioncouldbeusefulasabiomarkerinnonthyroidalillnesssyndromeapilotstudy AT varelapatricia similarhypothyroidandsepsiscirculatingmrnaexpressioncouldbeusefulasabiomarkerinnonthyroidalillnesssyndromeapilotstudy AT martinsleonardo similarhypothyroidandsepsiscirculatingmrnaexpressioncouldbeusefulasabiomarkerinnonthyroidalillnesssyndromeapilotstudy AT pesquerojoaobosco similarhypothyroidandsepsiscirculatingmrnaexpressioncouldbeusefulasabiomarkerinnonthyroidalillnesssyndromeapilotstudy AT camachocleberp similarhypothyroidandsepsiscirculatingmrnaexpressioncouldbeusefulasabiomarkerinnonthyroidalillnesssyndromeapilotstudy |