Cargando…

PBK correlates with prognosis, immune escape and drug response in LUAD

PBK (PDZ-binding kinase) is a protein-coding gene that encodes a serine/threonine protein kinase associated with the dual-specific mitogen-activated protein kinase (MAPKK) family. Overexpression of this gene is closely linked to tumor development. In this study, we aimed to investigate the role of P...

Descripción completa

Detalles Bibliográficos
Autores principales: Ma, Hongyu, Zhang, Jing, Shi, Yan, Wang, Ziqiang, Nie, Wenhu, Cai, Jingjing, Huang, Yinglong, Liu, Bin, Wang, Xiaojing, Lian, Chaoqun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10665404/
https://www.ncbi.nlm.nih.gov/pubmed/37993518
http://dx.doi.org/10.1038/s41598-023-47781-7
_version_ 1785148863076630528
author Ma, Hongyu
Zhang, Jing
Shi, Yan
Wang, Ziqiang
Nie, Wenhu
Cai, Jingjing
Huang, Yinglong
Liu, Bin
Wang, Xiaojing
Lian, Chaoqun
author_facet Ma, Hongyu
Zhang, Jing
Shi, Yan
Wang, Ziqiang
Nie, Wenhu
Cai, Jingjing
Huang, Yinglong
Liu, Bin
Wang, Xiaojing
Lian, Chaoqun
author_sort Ma, Hongyu
collection PubMed
description PBK (PDZ-binding kinase) is a protein-coding gene that encodes a serine/threonine protein kinase associated with the dual-specific mitogen-activated protein kinase (MAPKK) family. Overexpression of this gene is closely linked to tumor development. In this study, we aimed to investigate the role of PBK in lung adenocarcinoma (LUAD) progression, prognosis, and immune evasion. We conducted a pan-cancer analysis of PBK to examine its expression and prognostic value. In the LUAD cohort, we analyzed PBK expression, prognosis, mutational features, and immune infiltration in groups with different PBK expression levels. We constructed a PBK-associated genomic model, integrated it into a nomogram, and compared high and low-risk subgroups. In our pan-cancer analysis, PBK was significantly upregulated, particularly in LUAD patients, and displayed poor prognosis. The high PBK expression group had many deletion mutations but still showed gene upregulation. Immune infiltration analysis indicated that PBK-triggered immune escape in the high expression group might relate to antigen presentation, dendritic cell, and CD8+ T cell infiltration. We constructed a 5-gene prognostic model and a nomogram to quantify individual survival probabilities. The PBK-associated gene prognostic model reliably predicted patient prognosis and drug response. Our findings offer new insights into PBK-induced immune escape and targeted therapy during LUAD development, providing valuable suggestions for clinical treatment approaches.
format Online
Article
Text
id pubmed-10665404
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-106654042023-11-22 PBK correlates with prognosis, immune escape and drug response in LUAD Ma, Hongyu Zhang, Jing Shi, Yan Wang, Ziqiang Nie, Wenhu Cai, Jingjing Huang, Yinglong Liu, Bin Wang, Xiaojing Lian, Chaoqun Sci Rep Article PBK (PDZ-binding kinase) is a protein-coding gene that encodes a serine/threonine protein kinase associated with the dual-specific mitogen-activated protein kinase (MAPKK) family. Overexpression of this gene is closely linked to tumor development. In this study, we aimed to investigate the role of PBK in lung adenocarcinoma (LUAD) progression, prognosis, and immune evasion. We conducted a pan-cancer analysis of PBK to examine its expression and prognostic value. In the LUAD cohort, we analyzed PBK expression, prognosis, mutational features, and immune infiltration in groups with different PBK expression levels. We constructed a PBK-associated genomic model, integrated it into a nomogram, and compared high and low-risk subgroups. In our pan-cancer analysis, PBK was significantly upregulated, particularly in LUAD patients, and displayed poor prognosis. The high PBK expression group had many deletion mutations but still showed gene upregulation. Immune infiltration analysis indicated that PBK-triggered immune escape in the high expression group might relate to antigen presentation, dendritic cell, and CD8+ T cell infiltration. We constructed a 5-gene prognostic model and a nomogram to quantify individual survival probabilities. The PBK-associated gene prognostic model reliably predicted patient prognosis and drug response. Our findings offer new insights into PBK-induced immune escape and targeted therapy during LUAD development, providing valuable suggestions for clinical treatment approaches. Nature Publishing Group UK 2023-11-22 /pmc/articles/PMC10665404/ /pubmed/37993518 http://dx.doi.org/10.1038/s41598-023-47781-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ma, Hongyu
Zhang, Jing
Shi, Yan
Wang, Ziqiang
Nie, Wenhu
Cai, Jingjing
Huang, Yinglong
Liu, Bin
Wang, Xiaojing
Lian, Chaoqun
PBK correlates with prognosis, immune escape and drug response in LUAD
title PBK correlates with prognosis, immune escape and drug response in LUAD
title_full PBK correlates with prognosis, immune escape and drug response in LUAD
title_fullStr PBK correlates with prognosis, immune escape and drug response in LUAD
title_full_unstemmed PBK correlates with prognosis, immune escape and drug response in LUAD
title_short PBK correlates with prognosis, immune escape and drug response in LUAD
title_sort pbk correlates with prognosis, immune escape and drug response in luad
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10665404/
https://www.ncbi.nlm.nih.gov/pubmed/37993518
http://dx.doi.org/10.1038/s41598-023-47781-7
work_keys_str_mv AT mahongyu pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT zhangjing pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT shiyan pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT wangziqiang pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT niewenhu pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT caijingjing pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT huangyinglong pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT liubin pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT wangxiaojing pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad
AT lianchaoqun pbkcorrelateswithprognosisimmuneescapeanddrugresponseinluad