Cargando…

Evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images

Debates persist regarding the impact of Stain Normalization (SN) on recent breast cancer histopathological studies. While some studies propose no influence on classification outcomes, others argue for improvement. This study aims to assess the efficacy of SN in breast cancer histopathological classi...

Descripción completa

Detalles Bibliográficos
Autores principales: Voon, Wingates, Hum, Yan Chai, Tee, Yee Kai, Yap, Wun-She, Nisar, Humaira, Mokayed, Hamam, Gupta, Neha, Lai, Khin Wee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10665422/
https://www.ncbi.nlm.nih.gov/pubmed/37993544
http://dx.doi.org/10.1038/s41598-023-46619-6
_version_ 1785148867185999872
author Voon, Wingates
Hum, Yan Chai
Tee, Yee Kai
Yap, Wun-She
Nisar, Humaira
Mokayed, Hamam
Gupta, Neha
Lai, Khin Wee
author_facet Voon, Wingates
Hum, Yan Chai
Tee, Yee Kai
Yap, Wun-She
Nisar, Humaira
Mokayed, Hamam
Gupta, Neha
Lai, Khin Wee
author_sort Voon, Wingates
collection PubMed
description Debates persist regarding the impact of Stain Normalization (SN) on recent breast cancer histopathological studies. While some studies propose no influence on classification outcomes, others argue for improvement. This study aims to assess the efficacy of SN in breast cancer histopathological classification, specifically focusing on Invasive Ductal Carcinoma (IDC) grading using Convolutional Neural Networks (CNNs). The null hypothesis asserts that SN has no effect on the accuracy of CNN-based IDC grading, while the alternative hypothesis suggests the contrary. We evaluated six SN techniques, with five templates selected as target images for the conventional SN techniques. We also utilized seven ImageNet pre-trained CNNs for IDC grading. The performance of models trained with and without SN was compared to discern the influence of SN on classification outcomes. The analysis unveiled a p-value of 0.11, indicating no statistically significant difference in Balanced Accuracy Scores between models trained with StainGAN-normalized images, achieving a score of 0.9196 (the best-performing SN technique), and models trained with non-normalized images, which scored 0.9308. As a result, we did not reject the null hypothesis, indicating that we found no evidence to support a significant discrepancy in effectiveness between stain-normalized and non-normalized datasets for IDC grading tasks. This study demonstrates that SN has a limited impact on IDC grading, challenging the assumption of performance enhancement through SN.
format Online
Article
Text
id pubmed-10665422
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-106654222023-11-22 Evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images Voon, Wingates Hum, Yan Chai Tee, Yee Kai Yap, Wun-She Nisar, Humaira Mokayed, Hamam Gupta, Neha Lai, Khin Wee Sci Rep Article Debates persist regarding the impact of Stain Normalization (SN) on recent breast cancer histopathological studies. While some studies propose no influence on classification outcomes, others argue for improvement. This study aims to assess the efficacy of SN in breast cancer histopathological classification, specifically focusing on Invasive Ductal Carcinoma (IDC) grading using Convolutional Neural Networks (CNNs). The null hypothesis asserts that SN has no effect on the accuracy of CNN-based IDC grading, while the alternative hypothesis suggests the contrary. We evaluated six SN techniques, with five templates selected as target images for the conventional SN techniques. We also utilized seven ImageNet pre-trained CNNs for IDC grading. The performance of models trained with and without SN was compared to discern the influence of SN on classification outcomes. The analysis unveiled a p-value of 0.11, indicating no statistically significant difference in Balanced Accuracy Scores between models trained with StainGAN-normalized images, achieving a score of 0.9196 (the best-performing SN technique), and models trained with non-normalized images, which scored 0.9308. As a result, we did not reject the null hypothesis, indicating that we found no evidence to support a significant discrepancy in effectiveness between stain-normalized and non-normalized datasets for IDC grading tasks. This study demonstrates that SN has a limited impact on IDC grading, challenging the assumption of performance enhancement through SN. Nature Publishing Group UK 2023-11-22 /pmc/articles/PMC10665422/ /pubmed/37993544 http://dx.doi.org/10.1038/s41598-023-46619-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Voon, Wingates
Hum, Yan Chai
Tee, Yee Kai
Yap, Wun-She
Nisar, Humaira
Mokayed, Hamam
Gupta, Neha
Lai, Khin Wee
Evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images
title Evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images
title_full Evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images
title_fullStr Evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images
title_full_unstemmed Evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images
title_short Evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images
title_sort evaluating the effectiveness of stain normalization techniques in automated grading of invasive ductal carcinoma histopathological images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10665422/
https://www.ncbi.nlm.nih.gov/pubmed/37993544
http://dx.doi.org/10.1038/s41598-023-46619-6
work_keys_str_mv AT voonwingates evaluatingtheeffectivenessofstainnormalizationtechniquesinautomatedgradingofinvasiveductalcarcinomahistopathologicalimages
AT humyanchai evaluatingtheeffectivenessofstainnormalizationtechniquesinautomatedgradingofinvasiveductalcarcinomahistopathologicalimages
AT teeyeekai evaluatingtheeffectivenessofstainnormalizationtechniquesinautomatedgradingofinvasiveductalcarcinomahistopathologicalimages
AT yapwunshe evaluatingtheeffectivenessofstainnormalizationtechniquesinautomatedgradingofinvasiveductalcarcinomahistopathologicalimages
AT nisarhumaira evaluatingtheeffectivenessofstainnormalizationtechniquesinautomatedgradingofinvasiveductalcarcinomahistopathologicalimages
AT mokayedhamam evaluatingtheeffectivenessofstainnormalizationtechniquesinautomatedgradingofinvasiveductalcarcinomahistopathologicalimages
AT guptaneha evaluatingtheeffectivenessofstainnormalizationtechniquesinautomatedgradingofinvasiveductalcarcinomahistopathologicalimages
AT laikhinwee evaluatingtheeffectivenessofstainnormalizationtechniquesinautomatedgradingofinvasiveductalcarcinomahistopathologicalimages