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rDNA magnification is a unique feature of germline stem cells

Ribosomal DNA (rDNA) encodes ribosomal RNA and exists as tandem repeats of hundreds of copies in the eukaryotic genome to meet the high demand of ribosome biogenesis. Tandemly repeated DNA elements are inherently unstable; thus, mechanisms must exist to maintain rDNA copy number (CN), in particular...

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Autores principales: Nelson, Jonathan O., Kumon, Tomohiro, Yamashita, Yukiko M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10666004/
https://www.ncbi.nlm.nih.gov/pubmed/37967216
http://dx.doi.org/10.1073/pnas.2314440120
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author Nelson, Jonathan O.
Kumon, Tomohiro
Yamashita, Yukiko M.
author_facet Nelson, Jonathan O.
Kumon, Tomohiro
Yamashita, Yukiko M.
author_sort Nelson, Jonathan O.
collection PubMed
description Ribosomal DNA (rDNA) encodes ribosomal RNA and exists as tandem repeats of hundreds of copies in the eukaryotic genome to meet the high demand of ribosome biogenesis. Tandemly repeated DNA elements are inherently unstable; thus, mechanisms must exist to maintain rDNA copy number (CN), in particular in the germline that continues through generations. A phenomenon called rDNA magnification was discovered over 50 y ago in Drosophila as a process that recovers the rDNA CN on chromosomes that harbor minimal CN. Our recent studies indicated that rDNA magnification is the mechanism to maintain rDNA CN under physiological conditions to counteract spontaneous CN loss that occurs during aging. Our previous studies that explored the mechanism of rDNA magnification implied that asymmetric division of germline stem cells (GSCs) may be particularly suited to achieve rDNA magnification. However, it remains elusive whether GSCs are the unique cell type that undergoes rDNA magnification or differentiating germ cells are also capable of magnification. In this study, we provide empirical evidence that suggests that rDNA magnification operates uniquely in GSCs, but not in differentiating germ cells. We further provide computer simulation that suggests that rDNA magnification is only achievable through asymmetric GSC divisions. We propose that despite known plasticity and transcriptomic similarity between GSCs and differentiating germ cells, GSCs’ unique ability to divide asymmetrically serves a critical role of maintaining rDNA CN through generations, supporting germline immortality.
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spelling pubmed-106660042023-11-15 rDNA magnification is a unique feature of germline stem cells Nelson, Jonathan O. Kumon, Tomohiro Yamashita, Yukiko M. Proc Natl Acad Sci U S A Biological Sciences Ribosomal DNA (rDNA) encodes ribosomal RNA and exists as tandem repeats of hundreds of copies in the eukaryotic genome to meet the high demand of ribosome biogenesis. Tandemly repeated DNA elements are inherently unstable; thus, mechanisms must exist to maintain rDNA copy number (CN), in particular in the germline that continues through generations. A phenomenon called rDNA magnification was discovered over 50 y ago in Drosophila as a process that recovers the rDNA CN on chromosomes that harbor minimal CN. Our recent studies indicated that rDNA magnification is the mechanism to maintain rDNA CN under physiological conditions to counteract spontaneous CN loss that occurs during aging. Our previous studies that explored the mechanism of rDNA magnification implied that asymmetric division of germline stem cells (GSCs) may be particularly suited to achieve rDNA magnification. However, it remains elusive whether GSCs are the unique cell type that undergoes rDNA magnification or differentiating germ cells are also capable of magnification. In this study, we provide empirical evidence that suggests that rDNA magnification operates uniquely in GSCs, but not in differentiating germ cells. We further provide computer simulation that suggests that rDNA magnification is only achievable through asymmetric GSC divisions. We propose that despite known plasticity and transcriptomic similarity between GSCs and differentiating germ cells, GSCs’ unique ability to divide asymmetrically serves a critical role of maintaining rDNA CN through generations, supporting germline immortality. National Academy of Sciences 2023-11-15 2023-11-21 /pmc/articles/PMC10666004/ /pubmed/37967216 http://dx.doi.org/10.1073/pnas.2314440120 Text en Copyright © 2023 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by/4.0/This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Biological Sciences
Nelson, Jonathan O.
Kumon, Tomohiro
Yamashita, Yukiko M.
rDNA magnification is a unique feature of germline stem cells
title rDNA magnification is a unique feature of germline stem cells
title_full rDNA magnification is a unique feature of germline stem cells
title_fullStr rDNA magnification is a unique feature of germline stem cells
title_full_unstemmed rDNA magnification is a unique feature of germline stem cells
title_short rDNA magnification is a unique feature of germline stem cells
title_sort rdna magnification is a unique feature of germline stem cells
topic Biological Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10666004/
https://www.ncbi.nlm.nih.gov/pubmed/37967216
http://dx.doi.org/10.1073/pnas.2314440120
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