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Methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (PET)

Aim Despite a vast number of articles on radiomics and machine learning in positron emission tomography (PET) imaging, clinical applicability remains limited, partly owing to poor methodological quality. We therefore systematically investigated the methodology described in publications on radiomics...

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Autores principales: Rogasch, Julian Manuel Michael, Shi, Kuangyu, Kersting, David, Seifert, Robert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Georg Thieme Verlag KG 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10667066/
https://www.ncbi.nlm.nih.gov/pubmed/37995708
http://dx.doi.org/10.1055/a-2198-0545
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author Rogasch, Julian Manuel Michael
Shi, Kuangyu
Kersting, David
Seifert, Robert
author_facet Rogasch, Julian Manuel Michael
Shi, Kuangyu
Kersting, David
Seifert, Robert
author_sort Rogasch, Julian Manuel Michael
collection PubMed
description Aim Despite a vast number of articles on radiomics and machine learning in positron emission tomography (PET) imaging, clinical applicability remains limited, partly owing to poor methodological quality. We therefore systematically investigated the methodology described in publications on radiomics and machine learning for PET-based outcome prediction. Methods A systematic search for original articles was run on PubMed. All articles were rated according to 17 criteria proposed by the authors. Criteria with >2 rating categories were binarized into “adequate” or “inadequate”. The association between the number of “adequate” criteria per article and the date of publication was examined. Results One hundred articles were identified (published between 07/2017 and 09/2023). The median proportion of articles per criterion that were rated “adequate” was 65% (range: 23–98%). Nineteen articles (19%) mentioned neither a test cohort nor cross-validation to separate training from testing. The median number of criteria with an “adequate” rating per article was 12.5 out of 17 (range, 4–17), and this did not increase with later dates of publication (Spearman’s rho, 0.094; p = 0.35). In 22 articles (22%), less than half of the items were rated “adequate”. Only 8% of articles published the source code, and 10% made the dataset openly available. Conclusion Among the articles investigated, methodological weaknesses have been identified, and the degree of compliance with recommendations on methodological quality and reporting shows potential for improvement. Better adherence to established guidelines could increase the clinical significance of radiomics and machine learning for PET-based outcome prediction and finally lead to the widespread use in routine clinical practice.
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spelling pubmed-106670662023-11-01 Methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (PET) Rogasch, Julian Manuel Michael Shi, Kuangyu Kersting, David Seifert, Robert Nuklearmedizin Aim Despite a vast number of articles on radiomics and machine learning in positron emission tomography (PET) imaging, clinical applicability remains limited, partly owing to poor methodological quality. We therefore systematically investigated the methodology described in publications on radiomics and machine learning for PET-based outcome prediction. Methods A systematic search for original articles was run on PubMed. All articles were rated according to 17 criteria proposed by the authors. Criteria with >2 rating categories were binarized into “adequate” or “inadequate”. The association between the number of “adequate” criteria per article and the date of publication was examined. Results One hundred articles were identified (published between 07/2017 and 09/2023). The median proportion of articles per criterion that were rated “adequate” was 65% (range: 23–98%). Nineteen articles (19%) mentioned neither a test cohort nor cross-validation to separate training from testing. The median number of criteria with an “adequate” rating per article was 12.5 out of 17 (range, 4–17), and this did not increase with later dates of publication (Spearman’s rho, 0.094; p = 0.35). In 22 articles (22%), less than half of the items were rated “adequate”. Only 8% of articles published the source code, and 10% made the dataset openly available. Conclusion Among the articles investigated, methodological weaknesses have been identified, and the degree of compliance with recommendations on methodological quality and reporting shows potential for improvement. Better adherence to established guidelines could increase the clinical significance of radiomics and machine learning for PET-based outcome prediction and finally lead to the widespread use in routine clinical practice. Georg Thieme Verlag KG 2023-11-23 /pmc/articles/PMC10667066/ /pubmed/37995708 http://dx.doi.org/10.1055/a-2198-0545 Text en The Author(s). This is an open access article published by Thieme under the terms of the Creative Commons Attribution License, permitting unrestricted use, distribution, and reproduction so long as the original work is properly cited. (https://creativecommons.org/licenses/by/4.0/). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rogasch, Julian Manuel Michael
Shi, Kuangyu
Kersting, David
Seifert, Robert
Methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (PET)
title Methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (PET)
title_full Methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (PET)
title_fullStr Methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (PET)
title_full_unstemmed Methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (PET)
title_short Methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (PET)
title_sort methodological evaluation of original articles on radiomics and machine learning for outcome prediction based on positron emission tomography (pet)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10667066/
https://www.ncbi.nlm.nih.gov/pubmed/37995708
http://dx.doi.org/10.1055/a-2198-0545
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