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Deciphering the Functional Long Non‐Coding RNAs Derived from MicroRNA Loci

Albeit the majority of eukaryotic genomes can be pervasively transcribed to a diverse population of lncRNAs and various subtypes of lncRNA are discovered. However, the genome‐wide study of miRNA‐derived lncRNAs is still lacking. Here, it is reported that over 800 miRNA gene‐originated lncRNAs (molnc...

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Autores principales: Li, Weiqian, Huo, Yue, Ren, Yue, Han, Chenxi, Li, Shuo, Wang, Kangning, He, Manman, Chen, Yiying, Wang, Yanran, Xu, Lingjie, Guo, Yuehong, Si, Yanmin, Gao, Yufeng, Xu, Jiayue, Wang, Xiaoshuang, Ma, Yanni, Yu, Jia, Wang, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10667839/
https://www.ncbi.nlm.nih.gov/pubmed/37849233
http://dx.doi.org/10.1002/advs.202203987
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author Li, Weiqian
Huo, Yue
Ren, Yue
Han, Chenxi
Li, Shuo
Wang, Kangning
He, Manman
Chen, Yiying
Wang, Yanran
Xu, Lingjie
Guo, Yuehong
Si, Yanmin
Gao, Yufeng
Xu, Jiayue
Wang, Xiaoshuang
Ma, Yanni
Yu, Jia
Wang, Fang
author_facet Li, Weiqian
Huo, Yue
Ren, Yue
Han, Chenxi
Li, Shuo
Wang, Kangning
He, Manman
Chen, Yiying
Wang, Yanran
Xu, Lingjie
Guo, Yuehong
Si, Yanmin
Gao, Yufeng
Xu, Jiayue
Wang, Xiaoshuang
Ma, Yanni
Yu, Jia
Wang, Fang
author_sort Li, Weiqian
collection PubMed
description Albeit the majority of eukaryotic genomes can be pervasively transcribed to a diverse population of lncRNAs and various subtypes of lncRNA are discovered. However, the genome‐wide study of miRNA‐derived lncRNAs is still lacking. Here, it is reported that over 800 miRNA gene‐originated lncRNAs (molncRNAs) are generated from miRNA loci. One of them, molnc‐301b from miR‐301b and miR‐130b, functions as an “RNA decoy” to facilitate dissociation of the chromatin remodeling protein SMARCA5 from chromatin and thereby sequester transcription and mRNA translation. Specifically, molnc‐301b attenuates erythropoiesis by mitigating the transcription of erythropoietic and translation‐associated genes, such as GATA1 and FOS. In addition, a useful and powerful CRISPR screen platform to characterize the biological functions of molncRNAs at large‐scale and single‐cell levels is established and 29 functional molncRNAs in hematopoietic cells are identified. Collectively, the focus is on miRNA‐derived lncRNAs, deciphering their landscape during normal hematopoiesis, and comprehensively evaluating their potential roles.
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spelling pubmed-106678392023-10-17 Deciphering the Functional Long Non‐Coding RNAs Derived from MicroRNA Loci Li, Weiqian Huo, Yue Ren, Yue Han, Chenxi Li, Shuo Wang, Kangning He, Manman Chen, Yiying Wang, Yanran Xu, Lingjie Guo, Yuehong Si, Yanmin Gao, Yufeng Xu, Jiayue Wang, Xiaoshuang Ma, Yanni Yu, Jia Wang, Fang Adv Sci (Weinh) Research Articles Albeit the majority of eukaryotic genomes can be pervasively transcribed to a diverse population of lncRNAs and various subtypes of lncRNA are discovered. However, the genome‐wide study of miRNA‐derived lncRNAs is still lacking. Here, it is reported that over 800 miRNA gene‐originated lncRNAs (molncRNAs) are generated from miRNA loci. One of them, molnc‐301b from miR‐301b and miR‐130b, functions as an “RNA decoy” to facilitate dissociation of the chromatin remodeling protein SMARCA5 from chromatin and thereby sequester transcription and mRNA translation. Specifically, molnc‐301b attenuates erythropoiesis by mitigating the transcription of erythropoietic and translation‐associated genes, such as GATA1 and FOS. In addition, a useful and powerful CRISPR screen platform to characterize the biological functions of molncRNAs at large‐scale and single‐cell levels is established and 29 functional molncRNAs in hematopoietic cells are identified. Collectively, the focus is on miRNA‐derived lncRNAs, deciphering their landscape during normal hematopoiesis, and comprehensively evaluating their potential roles. John Wiley and Sons Inc. 2023-10-17 /pmc/articles/PMC10667839/ /pubmed/37849233 http://dx.doi.org/10.1002/advs.202203987 Text en © 2023 The Authors. Advanced Science published by Wiley‐VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Li, Weiqian
Huo, Yue
Ren, Yue
Han, Chenxi
Li, Shuo
Wang, Kangning
He, Manman
Chen, Yiying
Wang, Yanran
Xu, Lingjie
Guo, Yuehong
Si, Yanmin
Gao, Yufeng
Xu, Jiayue
Wang, Xiaoshuang
Ma, Yanni
Yu, Jia
Wang, Fang
Deciphering the Functional Long Non‐Coding RNAs Derived from MicroRNA Loci
title Deciphering the Functional Long Non‐Coding RNAs Derived from MicroRNA Loci
title_full Deciphering the Functional Long Non‐Coding RNAs Derived from MicroRNA Loci
title_fullStr Deciphering the Functional Long Non‐Coding RNAs Derived from MicroRNA Loci
title_full_unstemmed Deciphering the Functional Long Non‐Coding RNAs Derived from MicroRNA Loci
title_short Deciphering the Functional Long Non‐Coding RNAs Derived from MicroRNA Loci
title_sort deciphering the functional long non‐coding rnas derived from microrna loci
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10667839/
https://www.ncbi.nlm.nih.gov/pubmed/37849233
http://dx.doi.org/10.1002/advs.202203987
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