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Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation
CXCL14 is one of the most evolutionarily conserved members of the chemokine family and is constitutionally expressed in multiple organs, suggesting that it is involved in the homeostasis maintenance of the system. CXCL14 is highly expressed in colon epithelial cells and shows obvious gene silencing...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671198/ https://www.ncbi.nlm.nih.gov/pubmed/38003215 http://dx.doi.org/10.3390/ijms242216027 |
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author | Wang, Yanjing Wang, Siyi Niu, Yuchen Ma, Buyong Li, Jingjing |
author_facet | Wang, Yanjing Wang, Siyi Niu, Yuchen Ma, Buyong Li, Jingjing |
author_sort | Wang, Yanjing |
collection | PubMed |
description | CXCL14 is one of the most evolutionarily conserved members of the chemokine family and is constitutionally expressed in multiple organs, suggesting that it is involved in the homeostasis maintenance of the system. CXCL14 is highly expressed in colon epithelial cells and shows obvious gene silencing in clinical colon cancer samples, suggesting that its silencing is related to the immune escape of cancer cells. In this paper, we analyzed the expression profiles of multiple human clinical colon cancer datasets and mouse colon cancer models to reveal the variation trend of CXCL14 expression during colitis, colon polyps, primary colon cancer, and liver metastases. The relationship between CXCL14 gene silencing and promoter hypermethylation was revealed through the colorectal carcinoma methylation database. The results suggest that CXCL14 is a tumor suppressor gene in colorectal carcinoma which is activated first and then silenced during the process of tumor occurrence and deterioration. Promoter hypermethylation is the main cause of CXCL14 silencing. The methylation level of CXCL14 is correlated with the anatomic site of tumor occurrence, positively correlated with patient age, and associated with prognosis. Reversing the hypermethylation of CXCL14 may be an epigenetic therapy for colon cancer. |
format | Online Article Text |
id | pubmed-10671198 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-106711982023-11-07 Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation Wang, Yanjing Wang, Siyi Niu, Yuchen Ma, Buyong Li, Jingjing Int J Mol Sci Article CXCL14 is one of the most evolutionarily conserved members of the chemokine family and is constitutionally expressed in multiple organs, suggesting that it is involved in the homeostasis maintenance of the system. CXCL14 is highly expressed in colon epithelial cells and shows obvious gene silencing in clinical colon cancer samples, suggesting that its silencing is related to the immune escape of cancer cells. In this paper, we analyzed the expression profiles of multiple human clinical colon cancer datasets and mouse colon cancer models to reveal the variation trend of CXCL14 expression during colitis, colon polyps, primary colon cancer, and liver metastases. The relationship between CXCL14 gene silencing and promoter hypermethylation was revealed through the colorectal carcinoma methylation database. The results suggest that CXCL14 is a tumor suppressor gene in colorectal carcinoma which is activated first and then silenced during the process of tumor occurrence and deterioration. Promoter hypermethylation is the main cause of CXCL14 silencing. The methylation level of CXCL14 is correlated with the anatomic site of tumor occurrence, positively correlated with patient age, and associated with prognosis. Reversing the hypermethylation of CXCL14 may be an epigenetic therapy for colon cancer. MDPI 2023-11-07 /pmc/articles/PMC10671198/ /pubmed/38003215 http://dx.doi.org/10.3390/ijms242216027 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Wang, Yanjing Wang, Siyi Niu, Yuchen Ma, Buyong Li, Jingjing Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation |
title | Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation |
title_full | Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation |
title_fullStr | Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation |
title_full_unstemmed | Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation |
title_short | Data Mining Suggests That CXCL14 Gene Silencing in Colon Cancer Is Due to Promoter Methylation |
title_sort | data mining suggests that cxcl14 gene silencing in colon cancer is due to promoter methylation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671198/ https://www.ncbi.nlm.nih.gov/pubmed/38003215 http://dx.doi.org/10.3390/ijms242216027 |
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