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Global Analysis of Lysine Lactylation of Germinated Seeds in Wheat

Protein lactylation is a newly discovered posttranslational modification (PTM) and is involved in multiple biological processes, both in mammalian cells and rice grains. However, the function of lysine lactylation remains unexplored in wheat. In this study, we performed the first comparative proteom...

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Autores principales: Zhu, Junke, Guo, Weiwei, Lan, Yubin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671351/
https://www.ncbi.nlm.nih.gov/pubmed/38003390
http://dx.doi.org/10.3390/ijms242216195
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author Zhu, Junke
Guo, Weiwei
Lan, Yubin
author_facet Zhu, Junke
Guo, Weiwei
Lan, Yubin
author_sort Zhu, Junke
collection PubMed
description Protein lactylation is a newly discovered posttranslational modification (PTM) and is involved in multiple biological processes, both in mammalian cells and rice grains. However, the function of lysine lactylation remains unexplored in wheat. In this study, we performed the first comparative proteomes and lysine lactylomes during seed germination of wheat. In total, 8000 proteins and 927 lactylated sites in 394 proteins were identified at 0 and 12 h after imbibition (HAI). Functional enrichment analysis showed that glycolysis- and TCA-cycle-related proteins were significantly enriched, and more differentially lactylated proteins were enriched in up-regulated lactylated proteins at 12 HAI vs. 0 HAI through the KEGG pathway and protein domain enrichment analysis compared to down-regulated lactylated proteins. Meanwhile, ten particularly preferred amino acids near lactylation sites were found in the embryos of germinated seeds: AA*K(la)T, A***K(la)D********A, K(la)A**T****K, K******A*K(la), K*K(la)********K, K(la)A******A, K(la)*A, KD****K(la), K********K(la) and K(la)G. These results supplied a comprehensive profile of lysine lactylation of wheat and indicated that protein lysine lactylation played important functions in several biological processes.
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spelling pubmed-106713512023-11-11 Global Analysis of Lysine Lactylation of Germinated Seeds in Wheat Zhu, Junke Guo, Weiwei Lan, Yubin Int J Mol Sci Communication Protein lactylation is a newly discovered posttranslational modification (PTM) and is involved in multiple biological processes, both in mammalian cells and rice grains. However, the function of lysine lactylation remains unexplored in wheat. In this study, we performed the first comparative proteomes and lysine lactylomes during seed germination of wheat. In total, 8000 proteins and 927 lactylated sites in 394 proteins were identified at 0 and 12 h after imbibition (HAI). Functional enrichment analysis showed that glycolysis- and TCA-cycle-related proteins were significantly enriched, and more differentially lactylated proteins were enriched in up-regulated lactylated proteins at 12 HAI vs. 0 HAI through the KEGG pathway and protein domain enrichment analysis compared to down-regulated lactylated proteins. Meanwhile, ten particularly preferred amino acids near lactylation sites were found in the embryos of germinated seeds: AA*K(la)T, A***K(la)D********A, K(la)A**T****K, K******A*K(la), K*K(la)********K, K(la)A******A, K(la)*A, KD****K(la), K********K(la) and K(la)G. These results supplied a comprehensive profile of lysine lactylation of wheat and indicated that protein lysine lactylation played important functions in several biological processes. MDPI 2023-11-11 /pmc/articles/PMC10671351/ /pubmed/38003390 http://dx.doi.org/10.3390/ijms242216195 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Zhu, Junke
Guo, Weiwei
Lan, Yubin
Global Analysis of Lysine Lactylation of Germinated Seeds in Wheat
title Global Analysis of Lysine Lactylation of Germinated Seeds in Wheat
title_full Global Analysis of Lysine Lactylation of Germinated Seeds in Wheat
title_fullStr Global Analysis of Lysine Lactylation of Germinated Seeds in Wheat
title_full_unstemmed Global Analysis of Lysine Lactylation of Germinated Seeds in Wheat
title_short Global Analysis of Lysine Lactylation of Germinated Seeds in Wheat
title_sort global analysis of lysine lactylation of germinated seeds in wheat
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671351/
https://www.ncbi.nlm.nih.gov/pubmed/38003390
http://dx.doi.org/10.3390/ijms242216195
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