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Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima

In higher plants, WRKY transcription factors are broadly involved in a variety of life activities and play an important role in both biotic and abiotic stress responses. However, little is known about the functions of WRKY genes in the popular species, such as Cucurbita maxima (pumpkin), which is pl...

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Autores principales: Zhou, Qin, Guo, Ziqing, Zhou, Xiaojun, Zhou, Lei, Wang, Duanhua, Bo, Kailiang, Zhu, Pu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671635/
https://www.ncbi.nlm.nih.gov/pubmed/38002973
http://dx.doi.org/10.3390/genes14112030
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author Zhou, Qin
Guo, Ziqing
Zhou, Xiaojun
Zhou, Lei
Wang, Duanhua
Bo, Kailiang
Zhu, Pu
author_facet Zhou, Qin
Guo, Ziqing
Zhou, Xiaojun
Zhou, Lei
Wang, Duanhua
Bo, Kailiang
Zhu, Pu
author_sort Zhou, Qin
collection PubMed
description In higher plants, WRKY transcription factors are broadly involved in a variety of life activities and play an important role in both biotic and abiotic stress responses. However, little is known about the functions of WRKY genes in the popular species, such as Cucurbita maxima (pumpkin), which is planted worldwide. In the present study, 102 CmWRKY genes were identified in the C. maxima genome. Chromosome location, multiple sequence alignment, phylogenetic analysis, and synteny analysis of the CmWRKYs were performed. Notably, we found that silencing CmWRKY22 promoted cucumber mosaic virus (CMV) infection, whereas overexpression of CmWRKY22 inhibited the CMV infection. Subsequently, an electrophoretic mobility shift assay (EMSA) confirmed that CmWRKY22 was able to bind to the W-box at the promoter of CmPR1b, which is a responsive gene of the salicylic acid (SA) signaling pathway. In summary, this study has provided a foundation for the antiviral functions of WRKY transcription factors in C. maxima.
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spelling pubmed-106716352023-10-31 Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima Zhou, Qin Guo, Ziqing Zhou, Xiaojun Zhou, Lei Wang, Duanhua Bo, Kailiang Zhu, Pu Genes (Basel) Article In higher plants, WRKY transcription factors are broadly involved in a variety of life activities and play an important role in both biotic and abiotic stress responses. However, little is known about the functions of WRKY genes in the popular species, such as Cucurbita maxima (pumpkin), which is planted worldwide. In the present study, 102 CmWRKY genes were identified in the C. maxima genome. Chromosome location, multiple sequence alignment, phylogenetic analysis, and synteny analysis of the CmWRKYs were performed. Notably, we found that silencing CmWRKY22 promoted cucumber mosaic virus (CMV) infection, whereas overexpression of CmWRKY22 inhibited the CMV infection. Subsequently, an electrophoretic mobility shift assay (EMSA) confirmed that CmWRKY22 was able to bind to the W-box at the promoter of CmPR1b, which is a responsive gene of the salicylic acid (SA) signaling pathway. In summary, this study has provided a foundation for the antiviral functions of WRKY transcription factors in C. maxima. MDPI 2023-10-31 /pmc/articles/PMC10671635/ /pubmed/38002973 http://dx.doi.org/10.3390/genes14112030 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhou, Qin
Guo, Ziqing
Zhou, Xiaojun
Zhou, Lei
Wang, Duanhua
Bo, Kailiang
Zhu, Pu
Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima
title Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima
title_full Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima
title_fullStr Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima
title_full_unstemmed Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima
title_short Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima
title_sort genome-wide identification and characterization of the wrky gene family in cucurbita maxima
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671635/
https://www.ncbi.nlm.nih.gov/pubmed/38002973
http://dx.doi.org/10.3390/genes14112030
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