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Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te)
In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-ho...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671658/ https://www.ncbi.nlm.nih.gov/pubmed/38003384 http://dx.doi.org/10.3390/ijms242216193 |
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author | Lei, Fengying Liu, Qingyu Zhong, Yeshuang Cui, Xinai Yu, Jie Hu, Zuquan Feng, Gang Zeng, Zhu Lu, Tao |
author_facet | Lei, Fengying Liu, Qingyu Zhong, Yeshuang Cui, Xinai Yu, Jie Hu, Zuquan Feng, Gang Zeng, Zhu Lu, Tao |
author_sort | Lei, Fengying |
collection | PubMed |
description | In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-hole-type chalcogen∙∙∙chalcogen interactions are scarcely reported in the literature. Herein, the π-hole-type intermolecular chalcogen∙∙∙chalcogen interactions in the model complexes formed between XO(2) (X = S, Se, Te) and CH(3)YCH(3) (Y = O, S, Se, Te) were systematically studied by using quantum chemical computations. The model complexes are stabilized via one primary X∙∙∙Y chalcogen bond (ChB) and the secondary C−H∙∙∙O hydrogen bonds. The binding energies of the studied complexes are in the range of −21.6~−60.4 kJ/mol. The X∙∙∙Y distances are significantly smaller than the sum of the van der Waals radii of the corresponding two atoms. The X∙∙∙Y ChBs in all the studied complexes except for the SO(2)∙∙∙CH(3)OCH(3) complex are strong in strength and display a partial covalent character revealed by conducting the quantum theory of atoms in molecules (QTAIM), a non-covalent interaction plot (NCIplot), and natural bond orbital (NBO) analyses. The symmetry-adapted perturbation theory (SAPT) analysis discloses that the X∙∙∙Y ChBs are primarily dominated by the electrostatic component. |
format | Online Article Text |
id | pubmed-10671658 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-106716582023-11-10 Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te) Lei, Fengying Liu, Qingyu Zhong, Yeshuang Cui, Xinai Yu, Jie Hu, Zuquan Feng, Gang Zeng, Zhu Lu, Tao Int J Mol Sci Article In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-hole-type chalcogen∙∙∙chalcogen interactions are scarcely reported in the literature. Herein, the π-hole-type intermolecular chalcogen∙∙∙chalcogen interactions in the model complexes formed between XO(2) (X = S, Se, Te) and CH(3)YCH(3) (Y = O, S, Se, Te) were systematically studied by using quantum chemical computations. The model complexes are stabilized via one primary X∙∙∙Y chalcogen bond (ChB) and the secondary C−H∙∙∙O hydrogen bonds. The binding energies of the studied complexes are in the range of −21.6~−60.4 kJ/mol. The X∙∙∙Y distances are significantly smaller than the sum of the van der Waals radii of the corresponding two atoms. The X∙∙∙Y ChBs in all the studied complexes except for the SO(2)∙∙∙CH(3)OCH(3) complex are strong in strength and display a partial covalent character revealed by conducting the quantum theory of atoms in molecules (QTAIM), a non-covalent interaction plot (NCIplot), and natural bond orbital (NBO) analyses. The symmetry-adapted perturbation theory (SAPT) analysis discloses that the X∙∙∙Y ChBs are primarily dominated by the electrostatic component. MDPI 2023-11-10 /pmc/articles/PMC10671658/ /pubmed/38003384 http://dx.doi.org/10.3390/ijms242216193 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lei, Fengying Liu, Qingyu Zhong, Yeshuang Cui, Xinai Yu, Jie Hu, Zuquan Feng, Gang Zeng, Zhu Lu, Tao Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te) |
title | Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te) |
title_full | Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te) |
title_fullStr | Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te) |
title_full_unstemmed | Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te) |
title_short | Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te) |
title_sort | computational insight into the nature and strength of the π-hole type chalcogen∙∙∙chalcogen interactions in the xo(2)∙∙∙ch(3)ych(3) complexes (x = s, se, te; y = o, s, se, te) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671658/ https://www.ncbi.nlm.nih.gov/pubmed/38003384 http://dx.doi.org/10.3390/ijms242216193 |
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