Cargando…

Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te)

In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-ho...

Descripción completa

Detalles Bibliográficos
Autores principales: Lei, Fengying, Liu, Qingyu, Zhong, Yeshuang, Cui, Xinai, Yu, Jie, Hu, Zuquan, Feng, Gang, Zeng, Zhu, Lu, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671658/
https://www.ncbi.nlm.nih.gov/pubmed/38003384
http://dx.doi.org/10.3390/ijms242216193
_version_ 1785140209659150336
author Lei, Fengying
Liu, Qingyu
Zhong, Yeshuang
Cui, Xinai
Yu, Jie
Hu, Zuquan
Feng, Gang
Zeng, Zhu
Lu, Tao
author_facet Lei, Fengying
Liu, Qingyu
Zhong, Yeshuang
Cui, Xinai
Yu, Jie
Hu, Zuquan
Feng, Gang
Zeng, Zhu
Lu, Tao
author_sort Lei, Fengying
collection PubMed
description In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-hole-type chalcogen∙∙∙chalcogen interactions are scarcely reported in the literature. Herein, the π-hole-type intermolecular chalcogen∙∙∙chalcogen interactions in the model complexes formed between XO(2) (X = S, Se, Te) and CH(3)YCH(3) (Y = O, S, Se, Te) were systematically studied by using quantum chemical computations. The model complexes are stabilized via one primary X∙∙∙Y chalcogen bond (ChB) and the secondary C−H∙∙∙O hydrogen bonds. The binding energies of the studied complexes are in the range of −21.6~−60.4 kJ/mol. The X∙∙∙Y distances are significantly smaller than the sum of the van der Waals radii of the corresponding two atoms. The X∙∙∙Y ChBs in all the studied complexes except for the SO(2)∙∙∙CH(3)OCH(3) complex are strong in strength and display a partial covalent character revealed by conducting the quantum theory of atoms in molecules (QTAIM), a non-covalent interaction plot (NCIplot), and natural bond orbital (NBO) analyses. The symmetry-adapted perturbation theory (SAPT) analysis discloses that the X∙∙∙Y ChBs are primarily dominated by the electrostatic component.
format Online
Article
Text
id pubmed-10671658
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-106716582023-11-10 Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te) Lei, Fengying Liu, Qingyu Zhong, Yeshuang Cui, Xinai Yu, Jie Hu, Zuquan Feng, Gang Zeng, Zhu Lu, Tao Int J Mol Sci Article In recent years, the non-covalent interactions between chalcogen centers have aroused substantial research interest because of their potential applications in organocatalysis, materials science, drug design, biological systems, crystal engineering, and molecular recognition. However, studies on π-hole-type chalcogen∙∙∙chalcogen interactions are scarcely reported in the literature. Herein, the π-hole-type intermolecular chalcogen∙∙∙chalcogen interactions in the model complexes formed between XO(2) (X = S, Se, Te) and CH(3)YCH(3) (Y = O, S, Se, Te) were systematically studied by using quantum chemical computations. The model complexes are stabilized via one primary X∙∙∙Y chalcogen bond (ChB) and the secondary C−H∙∙∙O hydrogen bonds. The binding energies of the studied complexes are in the range of −21.6~−60.4 kJ/mol. The X∙∙∙Y distances are significantly smaller than the sum of the van der Waals radii of the corresponding two atoms. The X∙∙∙Y ChBs in all the studied complexes except for the SO(2)∙∙∙CH(3)OCH(3) complex are strong in strength and display a partial covalent character revealed by conducting the quantum theory of atoms in molecules (QTAIM), a non-covalent interaction plot (NCIplot), and natural bond orbital (NBO) analyses. The symmetry-adapted perturbation theory (SAPT) analysis discloses that the X∙∙∙Y ChBs are primarily dominated by the electrostatic component. MDPI 2023-11-10 /pmc/articles/PMC10671658/ /pubmed/38003384 http://dx.doi.org/10.3390/ijms242216193 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lei, Fengying
Liu, Qingyu
Zhong, Yeshuang
Cui, Xinai
Yu, Jie
Hu, Zuquan
Feng, Gang
Zeng, Zhu
Lu, Tao
Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te)
title Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te)
title_full Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te)
title_fullStr Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te)
title_full_unstemmed Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te)
title_short Computational Insight into the Nature and Strength of the π-Hole Type Chalcogen∙∙∙Chalcogen Interactions in the XO(2)∙∙∙CH(3)YCH(3) Complexes (X = S, Se, Te; Y = O, S, Se, Te)
title_sort computational insight into the nature and strength of the π-hole type chalcogen∙∙∙chalcogen interactions in the xo(2)∙∙∙ch(3)ych(3) complexes (x = s, se, te; y = o, s, se, te)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10671658/
https://www.ncbi.nlm.nih.gov/pubmed/38003384
http://dx.doi.org/10.3390/ijms242216193
work_keys_str_mv AT leifengying computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete
AT liuqingyu computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete
AT zhongyeshuang computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete
AT cuixinai computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete
AT yujie computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete
AT huzuquan computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete
AT fenggang computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete
AT zengzhu computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete
AT lutao computationalinsightintothenatureandstrengthofthepholetypechalcogenchalcogeninteractionsinthexo2ch3ych3complexesxsseteyossete