Cargando…

Development and Validation of Deep-Learning-Based Sepsis and Septic Shock Early Prediction System (DeepSEPS) Using Real-World ICU Data

Background: Successful sepsis treatment depends on early diagnosis. We aimed to develop and validate a system to predict sepsis and septic shock in real time using deep learning. Methods: Clinical data were retrospectively collected from electronic medical records (EMRs). Data from 2010 to 2019 were...

Descripción completa

Detalles Bibliográficos
Autores principales: Kim, Taehwa, Tae, Yunwon, Yeo, Hye Ju, Jang, Jin Ho, Cho, Kyungjae, Yoo, Dongjoon, Lee, Yeha, Ahn, Sung-Ho, Kim, Younga, Lee, Narae, Cho, Woo Hyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10672000/
https://www.ncbi.nlm.nih.gov/pubmed/38002768
http://dx.doi.org/10.3390/jcm12227156
_version_ 1785149480874541056
author Kim, Taehwa
Tae, Yunwon
Yeo, Hye Ju
Jang, Jin Ho
Cho, Kyungjae
Yoo, Dongjoon
Lee, Yeha
Ahn, Sung-Ho
Kim, Younga
Lee, Narae
Cho, Woo Hyun
author_facet Kim, Taehwa
Tae, Yunwon
Yeo, Hye Ju
Jang, Jin Ho
Cho, Kyungjae
Yoo, Dongjoon
Lee, Yeha
Ahn, Sung-Ho
Kim, Younga
Lee, Narae
Cho, Woo Hyun
author_sort Kim, Taehwa
collection PubMed
description Background: Successful sepsis treatment depends on early diagnosis. We aimed to develop and validate a system to predict sepsis and septic shock in real time using deep learning. Methods: Clinical data were retrospectively collected from electronic medical records (EMRs). Data from 2010 to 2019 were used as development data, and data from 2020 to 2021 were used as validation data. The collected EMRs consisted of eight vital signs, 13 laboratory data points, and three demographic information items. We validated the deep-learning-based sepsis and septic shock early prediction system (DeepSEPS) using the validation datasets and compared our system with other traditional early warning scoring systems, such as the national early warning score, sequential organ failure assessment (SOFA), and quick sequential organ failure assessment. Results: DeepSEPS achieved even higher area under receiver operating characteristic curve (AUROC) values (0.7888 and 0.8494 for sepsis and septic shock, respectively) than SOFA. The prediction performance of traditional scoring systems was enhanced because the early prediction time point was close to the onset time of sepsis; however, the DeepSEPS scoring system consistently outperformed all conventional scoring systems at all time points. Furthermore, at the time of onset of sepsis and septic shock, DeepSEPS showed the highest AUROC (0.9346). Conclusions: The sepsis and septic shock early warning system developed in this study exhibited a performance that is worth considering when predicting sepsis and septic shock compared to other traditional early warning scoring systems. DeepSEPS showed better performance than existing sepsis prediction programs. This novel real-time system that simultaneously predicts sepsis and septic shock requires further validation.
format Online
Article
Text
id pubmed-10672000
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-106720002023-11-17 Development and Validation of Deep-Learning-Based Sepsis and Septic Shock Early Prediction System (DeepSEPS) Using Real-World ICU Data Kim, Taehwa Tae, Yunwon Yeo, Hye Ju Jang, Jin Ho Cho, Kyungjae Yoo, Dongjoon Lee, Yeha Ahn, Sung-Ho Kim, Younga Lee, Narae Cho, Woo Hyun J Clin Med Article Background: Successful sepsis treatment depends on early diagnosis. We aimed to develop and validate a system to predict sepsis and septic shock in real time using deep learning. Methods: Clinical data were retrospectively collected from electronic medical records (EMRs). Data from 2010 to 2019 were used as development data, and data from 2020 to 2021 were used as validation data. The collected EMRs consisted of eight vital signs, 13 laboratory data points, and three demographic information items. We validated the deep-learning-based sepsis and septic shock early prediction system (DeepSEPS) using the validation datasets and compared our system with other traditional early warning scoring systems, such as the national early warning score, sequential organ failure assessment (SOFA), and quick sequential organ failure assessment. Results: DeepSEPS achieved even higher area under receiver operating characteristic curve (AUROC) values (0.7888 and 0.8494 for sepsis and septic shock, respectively) than SOFA. The prediction performance of traditional scoring systems was enhanced because the early prediction time point was close to the onset time of sepsis; however, the DeepSEPS scoring system consistently outperformed all conventional scoring systems at all time points. Furthermore, at the time of onset of sepsis and septic shock, DeepSEPS showed the highest AUROC (0.9346). Conclusions: The sepsis and septic shock early warning system developed in this study exhibited a performance that is worth considering when predicting sepsis and septic shock compared to other traditional early warning scoring systems. DeepSEPS showed better performance than existing sepsis prediction programs. This novel real-time system that simultaneously predicts sepsis and septic shock requires further validation. MDPI 2023-11-17 /pmc/articles/PMC10672000/ /pubmed/38002768 http://dx.doi.org/10.3390/jcm12227156 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kim, Taehwa
Tae, Yunwon
Yeo, Hye Ju
Jang, Jin Ho
Cho, Kyungjae
Yoo, Dongjoon
Lee, Yeha
Ahn, Sung-Ho
Kim, Younga
Lee, Narae
Cho, Woo Hyun
Development and Validation of Deep-Learning-Based Sepsis and Septic Shock Early Prediction System (DeepSEPS) Using Real-World ICU Data
title Development and Validation of Deep-Learning-Based Sepsis and Septic Shock Early Prediction System (DeepSEPS) Using Real-World ICU Data
title_full Development and Validation of Deep-Learning-Based Sepsis and Septic Shock Early Prediction System (DeepSEPS) Using Real-World ICU Data
title_fullStr Development and Validation of Deep-Learning-Based Sepsis and Septic Shock Early Prediction System (DeepSEPS) Using Real-World ICU Data
title_full_unstemmed Development and Validation of Deep-Learning-Based Sepsis and Septic Shock Early Prediction System (DeepSEPS) Using Real-World ICU Data
title_short Development and Validation of Deep-Learning-Based Sepsis and Septic Shock Early Prediction System (DeepSEPS) Using Real-World ICU Data
title_sort development and validation of deep-learning-based sepsis and septic shock early prediction system (deepseps) using real-world icu data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10672000/
https://www.ncbi.nlm.nih.gov/pubmed/38002768
http://dx.doi.org/10.3390/jcm12227156
work_keys_str_mv AT kimtaehwa developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT taeyunwon developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT yeohyeju developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT jangjinho developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT chokyungjae developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT yoodongjoon developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT leeyeha developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT ahnsungho developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT kimyounga developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT leenarae developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata
AT chowoohyun developmentandvalidationofdeeplearningbasedsepsisandsepticshockearlypredictionsystemdeepsepsusingrealworldicudata