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Maximising Affordability of Real-Time Colorimetric LAMP Assays

Molecular diagnostics have become indispensable in healthcare, agriculture, and environmental monitoring. This diagnostic form can offer rapid and precise identification of pathogens and biomarkers. However, traditional laboratory-based molecular testing methods can be expensive and require speciali...

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Autores principales: Strachan, Simon, Chakraborty, Moutoshi, Sallam, Mohamed, Bhuiyan, Shamsul A., Ford, Rebecca, Nguyen, Nam-Trung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10673270/
https://www.ncbi.nlm.nih.gov/pubmed/38004958
http://dx.doi.org/10.3390/mi14112101
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author Strachan, Simon
Chakraborty, Moutoshi
Sallam, Mohamed
Bhuiyan, Shamsul A.
Ford, Rebecca
Nguyen, Nam-Trung
author_facet Strachan, Simon
Chakraborty, Moutoshi
Sallam, Mohamed
Bhuiyan, Shamsul A.
Ford, Rebecca
Nguyen, Nam-Trung
author_sort Strachan, Simon
collection PubMed
description Molecular diagnostics have become indispensable in healthcare, agriculture, and environmental monitoring. This diagnostic form can offer rapid and precise identification of pathogens and biomarkers. However, traditional laboratory-based molecular testing methods can be expensive and require specialised training, limiting their accessibility in resource-limited settings and on-site applications. To overcome these challenges, this study proposes an innovative approach to reducing costs and complexity in portable colorimetric loop-mediated isothermal amplification (LAMP) devices. The research evaluates different resistive heating systems to create an energy-efficient, cost-effective, and compact device to heat a polydimethylsiloxane (PDMS) block for precise temperature control during LAMP reactions. By combining this novel heating system with an off-the-shelf red-green-blue (RGB) sensor to detect and quantify colour changes, the integrated system can accurately detect Leifsonia xyli subsp. xyli, the bacteria responsible for ratoon stunting disease (RSD) in sugarcane. The experimental validation of this system demonstrates its ability to detect the target pathogen in real time, making it an important development for low cost, portable, and easy-to-use molecular diagnostics in healthcare, agriculture, and environmental monitoring applications.
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spelling pubmed-106732702023-11-15 Maximising Affordability of Real-Time Colorimetric LAMP Assays Strachan, Simon Chakraborty, Moutoshi Sallam, Mohamed Bhuiyan, Shamsul A. Ford, Rebecca Nguyen, Nam-Trung Micromachines (Basel) Article Molecular diagnostics have become indispensable in healthcare, agriculture, and environmental monitoring. This diagnostic form can offer rapid and precise identification of pathogens and biomarkers. However, traditional laboratory-based molecular testing methods can be expensive and require specialised training, limiting their accessibility in resource-limited settings and on-site applications. To overcome these challenges, this study proposes an innovative approach to reducing costs and complexity in portable colorimetric loop-mediated isothermal amplification (LAMP) devices. The research evaluates different resistive heating systems to create an energy-efficient, cost-effective, and compact device to heat a polydimethylsiloxane (PDMS) block for precise temperature control during LAMP reactions. By combining this novel heating system with an off-the-shelf red-green-blue (RGB) sensor to detect and quantify colour changes, the integrated system can accurately detect Leifsonia xyli subsp. xyli, the bacteria responsible for ratoon stunting disease (RSD) in sugarcane. The experimental validation of this system demonstrates its ability to detect the target pathogen in real time, making it an important development for low cost, portable, and easy-to-use molecular diagnostics in healthcare, agriculture, and environmental monitoring applications. MDPI 2023-11-15 /pmc/articles/PMC10673270/ /pubmed/38004958 http://dx.doi.org/10.3390/mi14112101 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Strachan, Simon
Chakraborty, Moutoshi
Sallam, Mohamed
Bhuiyan, Shamsul A.
Ford, Rebecca
Nguyen, Nam-Trung
Maximising Affordability of Real-Time Colorimetric LAMP Assays
title Maximising Affordability of Real-Time Colorimetric LAMP Assays
title_full Maximising Affordability of Real-Time Colorimetric LAMP Assays
title_fullStr Maximising Affordability of Real-Time Colorimetric LAMP Assays
title_full_unstemmed Maximising Affordability of Real-Time Colorimetric LAMP Assays
title_short Maximising Affordability of Real-Time Colorimetric LAMP Assays
title_sort maximising affordability of real-time colorimetric lamp assays
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10673270/
https://www.ncbi.nlm.nih.gov/pubmed/38004958
http://dx.doi.org/10.3390/mi14112101
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