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The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice
Premature senescence is a common occurrence in rice production, and seriously affects rice plants’ nutrient utilization and growth. A total of 120 recombinant inbred lines (RILs) were obtained from successive self-crossing of F(12) generations derived from Huazhan and Nekken2. The superoxide dismuta...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10674301/ https://www.ncbi.nlm.nih.gov/pubmed/38005709 http://dx.doi.org/10.3390/plants12223812 |
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author | Yin, Wenjing Huang, Zhao Zhong, Qianqian Tang, Luyao Wu, Richeng Li, Sanfeng Mao, Yijian Zhu, Xudong Wang, Changchun Rao, Yuchun Wang, Yuexing |
author_facet | Yin, Wenjing Huang, Zhao Zhong, Qianqian Tang, Luyao Wu, Richeng Li, Sanfeng Mao, Yijian Zhu, Xudong Wang, Changchun Rao, Yuchun Wang, Yuexing |
author_sort | Yin, Wenjing |
collection | PubMed |
description | Premature senescence is a common occurrence in rice production, and seriously affects rice plants’ nutrient utilization and growth. A total of 120 recombinant inbred lines (RILs) were obtained from successive self-crossing of F(12) generations derived from Huazhan and Nekken2. The superoxide dismutase (SOD) activity, malondialdehyde (MDA), content and catalase (CAT) activity related to the anti-senescence traits and enzyme activity index of rice were measured for QTL mapping using 4858 SNPs. Thirteen QTLs related to anti-senescence were found, among which the highest LOD score was 5.70. Eighteen anti-senescence-related genes were found in these regions, and ten of them differed significantly between the parents. It was inferred that LOC_Os01g61500, LOC_Os01g61810, and LOC_Os04g40130 became involved in the regulation of the anti-senescence molecular network upon upregulation of their expression levels. The identified anti-senescence-related QTLs and candidate genes provide a genetic basis for further research on the mechanism of the molecular network that regulates premature senescence. |
format | Online Article Text |
id | pubmed-10674301 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-106743012023-11-09 The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice Yin, Wenjing Huang, Zhao Zhong, Qianqian Tang, Luyao Wu, Richeng Li, Sanfeng Mao, Yijian Zhu, Xudong Wang, Changchun Rao, Yuchun Wang, Yuexing Plants (Basel) Article Premature senescence is a common occurrence in rice production, and seriously affects rice plants’ nutrient utilization and growth. A total of 120 recombinant inbred lines (RILs) were obtained from successive self-crossing of F(12) generations derived from Huazhan and Nekken2. The superoxide dismutase (SOD) activity, malondialdehyde (MDA), content and catalase (CAT) activity related to the anti-senescence traits and enzyme activity index of rice were measured for QTL mapping using 4858 SNPs. Thirteen QTLs related to anti-senescence were found, among which the highest LOD score was 5.70. Eighteen anti-senescence-related genes were found in these regions, and ten of them differed significantly between the parents. It was inferred that LOC_Os01g61500, LOC_Os01g61810, and LOC_Os04g40130 became involved in the regulation of the anti-senescence molecular network upon upregulation of their expression levels. The identified anti-senescence-related QTLs and candidate genes provide a genetic basis for further research on the mechanism of the molecular network that regulates premature senescence. MDPI 2023-11-09 /pmc/articles/PMC10674301/ /pubmed/38005709 http://dx.doi.org/10.3390/plants12223812 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Yin, Wenjing Huang, Zhao Zhong, Qianqian Tang, Luyao Wu, Richeng Li, Sanfeng Mao, Yijian Zhu, Xudong Wang, Changchun Rao, Yuchun Wang, Yuexing The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice |
title | The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice |
title_full | The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice |
title_fullStr | The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice |
title_full_unstemmed | The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice |
title_short | The Mining of Genetic Loci and the Analysis of Candidate Genes to Identify the Physical and Chemical Markers of Anti-Senescence in Rice |
title_sort | mining of genetic loci and the analysis of candidate genes to identify the physical and chemical markers of anti-senescence in rice |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10674301/ https://www.ncbi.nlm.nih.gov/pubmed/38005709 http://dx.doi.org/10.3390/plants12223812 |
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