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Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Solanum tuberosum L.)

Abscisic acid (ABA) is an important stress hormone that affects plants’ tolerance to stress. Changes in the content of abscisic can have an impact on plant responses to abiotic stress. The abscisic acid aldehyde oxidase (AAO) plays a crucial role in the final step in the synthesis of abscisic acid;...

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Autores principales: Yao, Panfeng, Zhang, Chunli, Zhang, Dan, Qin, Tianyuan, Xie, Xiaofei, Liu, Yuhui, Liu, Zhen, Bai, Jiangping, Bi, Zhenzhen, Cui, Junmei, Liang, Jingwen, Sun, Chao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10674669/
https://www.ncbi.nlm.nih.gov/pubmed/38005706
http://dx.doi.org/10.3390/plants12223809
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author Yao, Panfeng
Zhang, Chunli
Zhang, Dan
Qin, Tianyuan
Xie, Xiaofei
Liu, Yuhui
Liu, Zhen
Bai, Jiangping
Bi, Zhenzhen
Cui, Junmei
Liang, Jingwen
Sun, Chao
author_facet Yao, Panfeng
Zhang, Chunli
Zhang, Dan
Qin, Tianyuan
Xie, Xiaofei
Liu, Yuhui
Liu, Zhen
Bai, Jiangping
Bi, Zhenzhen
Cui, Junmei
Liang, Jingwen
Sun, Chao
author_sort Yao, Panfeng
collection PubMed
description Abscisic acid (ABA) is an important stress hormone that affects plants’ tolerance to stress. Changes in the content of abscisic can have an impact on plant responses to abiotic stress. The abscisic acid aldehyde oxidase (AAO) plays a crucial role in the final step in the synthesis of abscisic acid; therefore, understanding the function of the AAO gene family is of great significance for insight into plants’ response to abiotic stresses. In this study, Solanum tuberosum AAO (StAAO) members were exhaustively explored using genome databases, and nine StAAOs were identified. Chromosomal location analysis indicated that StAAO genes mapped to 4 of the 14 potato chromosomes. Further analyses of gene structure and motif composition showed that members of the specific StAAO subfamily showed relatively conserved characteristics. Phylogenetic relationship analysis indicated that StAAOs proteins were divided into three major clades. Promoter analysis showed that most StAAO promoters contained cis-elements related to abiotic stress response and plant hormones. The results of tissue-specific expression analysis indicated that StAAO4 was predominantly expressed in the roots. Analysis of transcriptome data revealed that StAAO2/4/6 genes responded significantly to drought treatments. Moreover, further qRT-PCR analysis results indicated that StAAO2/4/6 not only significantly responded to drought stress but also to various phytohormone (ABA, SA, and MeJA) and abiotic stresses (salt and low temperature), albeit with different expression patterns. In summary, our study provides comprehensive insights into the sequence characteristics, structural properties, evolutionary relationships, and expression patterns of the StAAO gene family. These findings lay the foundation for a deeper understanding of the StAAO gene family and offer a potential genetic resource for breeding drought-resistant potato varieties.
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spelling pubmed-106746692023-11-09 Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Solanum tuberosum L.) Yao, Panfeng Zhang, Chunli Zhang, Dan Qin, Tianyuan Xie, Xiaofei Liu, Yuhui Liu, Zhen Bai, Jiangping Bi, Zhenzhen Cui, Junmei Liang, Jingwen Sun, Chao Plants (Basel) Article Abscisic acid (ABA) is an important stress hormone that affects plants’ tolerance to stress. Changes in the content of abscisic can have an impact on plant responses to abiotic stress. The abscisic acid aldehyde oxidase (AAO) plays a crucial role in the final step in the synthesis of abscisic acid; therefore, understanding the function of the AAO gene family is of great significance for insight into plants’ response to abiotic stresses. In this study, Solanum tuberosum AAO (StAAO) members were exhaustively explored using genome databases, and nine StAAOs were identified. Chromosomal location analysis indicated that StAAO genes mapped to 4 of the 14 potato chromosomes. Further analyses of gene structure and motif composition showed that members of the specific StAAO subfamily showed relatively conserved characteristics. Phylogenetic relationship analysis indicated that StAAOs proteins were divided into three major clades. Promoter analysis showed that most StAAO promoters contained cis-elements related to abiotic stress response and plant hormones. The results of tissue-specific expression analysis indicated that StAAO4 was predominantly expressed in the roots. Analysis of transcriptome data revealed that StAAO2/4/6 genes responded significantly to drought treatments. Moreover, further qRT-PCR analysis results indicated that StAAO2/4/6 not only significantly responded to drought stress but also to various phytohormone (ABA, SA, and MeJA) and abiotic stresses (salt and low temperature), albeit with different expression patterns. In summary, our study provides comprehensive insights into the sequence characteristics, structural properties, evolutionary relationships, and expression patterns of the StAAO gene family. These findings lay the foundation for a deeper understanding of the StAAO gene family and offer a potential genetic resource for breeding drought-resistant potato varieties. MDPI 2023-11-09 /pmc/articles/PMC10674669/ /pubmed/38005706 http://dx.doi.org/10.3390/plants12223809 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yao, Panfeng
Zhang, Chunli
Zhang, Dan
Qin, Tianyuan
Xie, Xiaofei
Liu, Yuhui
Liu, Zhen
Bai, Jiangping
Bi, Zhenzhen
Cui, Junmei
Liang, Jingwen
Sun, Chao
Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Solanum tuberosum L.)
title Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Solanum tuberosum L.)
title_full Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Solanum tuberosum L.)
title_fullStr Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Solanum tuberosum L.)
title_full_unstemmed Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Solanum tuberosum L.)
title_short Characterization and Identification of Drought-Responsive ABA-Aldehyde Oxidase (AAO) Genes in Potato (Solanum tuberosum L.)
title_sort characterization and identification of drought-responsive aba-aldehyde oxidase (aao) genes in potato (solanum tuberosum l.)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10674669/
https://www.ncbi.nlm.nih.gov/pubmed/38005706
http://dx.doi.org/10.3390/plants12223809
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