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Diversity of bacteria associated with lichens in Mt. Yunmeng in Beijing, China
Lichens host highly complex and diverse microbial communities, which may perform essential functions in these symbiotic micro-ecosystems. In this research, sequencing of 16S rRNA was used to investigate the bacterial communities associated with lichens of two growth forms (foliose and crustose). Res...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10676717/ https://www.ncbi.nlm.nih.gov/pubmed/38025692 http://dx.doi.org/10.7717/peerj.16442 |
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author | Li, Yimeng Huang, Yinzhi Wronski, Torsten Huang, Manrong |
author_facet | Li, Yimeng Huang, Yinzhi Wronski, Torsten Huang, Manrong |
author_sort | Li, Yimeng |
collection | PubMed |
description | Lichens host highly complex and diverse microbial communities, which may perform essential functions in these symbiotic micro-ecosystems. In this research, sequencing of 16S rRNA was used to investigate the bacterial communities associated with lichens of two growth forms (foliose and crustose). Results showed that Pseudomonadota, Actinomycetota and Acidobacteriota were dominant phyla in both types of lichens, while Acetobacterales and Hyphomicrobiales were the dominant orders. Alpha diversity index showed that the richness of bacteria hosted by foliose lichens was significantly higher than that hosted by crustose ones. Principal co-ordinates analysis showed a significant difference between beta diversity of the foliose lichen-associated bacterial communities and those of crustose lichen-associated ones. Gene function prediction showed most functions, annotated by the lichen-associated bacteria, to be related to metabolism, suggesting that related bacteria may provide nutrients to their hosts. Generally, our results propose that microbial communities play important roles in fixing nitrogen, providing nutrients, and controlling harmful microorganisms, and are therefore an integral and indispensable part of lichens. |
format | Online Article Text |
id | pubmed-10676717 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-106767172023-11-23 Diversity of bacteria associated with lichens in Mt. Yunmeng in Beijing, China Li, Yimeng Huang, Yinzhi Wronski, Torsten Huang, Manrong PeerJ Microbiology Lichens host highly complex and diverse microbial communities, which may perform essential functions in these symbiotic micro-ecosystems. In this research, sequencing of 16S rRNA was used to investigate the bacterial communities associated with lichens of two growth forms (foliose and crustose). Results showed that Pseudomonadota, Actinomycetota and Acidobacteriota were dominant phyla in both types of lichens, while Acetobacterales and Hyphomicrobiales were the dominant orders. Alpha diversity index showed that the richness of bacteria hosted by foliose lichens was significantly higher than that hosted by crustose ones. Principal co-ordinates analysis showed a significant difference between beta diversity of the foliose lichen-associated bacterial communities and those of crustose lichen-associated ones. Gene function prediction showed most functions, annotated by the lichen-associated bacteria, to be related to metabolism, suggesting that related bacteria may provide nutrients to their hosts. Generally, our results propose that microbial communities play important roles in fixing nitrogen, providing nutrients, and controlling harmful microorganisms, and are therefore an integral and indispensable part of lichens. PeerJ Inc. 2023-11-23 /pmc/articles/PMC10676717/ /pubmed/38025692 http://dx.doi.org/10.7717/peerj.16442 Text en © 2023 Li et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Microbiology Li, Yimeng Huang, Yinzhi Wronski, Torsten Huang, Manrong Diversity of bacteria associated with lichens in Mt. Yunmeng in Beijing, China |
title | Diversity of bacteria associated with lichens in Mt. Yunmeng in Beijing, China |
title_full | Diversity of bacteria associated with lichens in Mt. Yunmeng in Beijing, China |
title_fullStr | Diversity of bacteria associated with lichens in Mt. Yunmeng in Beijing, China |
title_full_unstemmed | Diversity of bacteria associated with lichens in Mt. Yunmeng in Beijing, China |
title_short | Diversity of bacteria associated with lichens in Mt. Yunmeng in Beijing, China |
title_sort | diversity of bacteria associated with lichens in mt. yunmeng in beijing, china |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10676717/ https://www.ncbi.nlm.nih.gov/pubmed/38025692 http://dx.doi.org/10.7717/peerj.16442 |
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