Cargando…

267. Small colony variants causing Prosthetic joint infection depict a different gene expression profile

BACKGROUND: Prosthetic joint infection (PJI) is an infectious complication after total joint arthroplasty (TJA) with a high socioeconomic impact. Staphylococcus species attain for more than half of PJI cases. Biofilm formation and the development of small colony variants (SCV) have proven to enhance...

Descripción completa

Detalles Bibliográficos
Autores principales: Fernández-Rodríguez, Diana, Carlos-Escalante, José Alberto, Esaú López-Jácome, Luis, Adriana Colin-Castro, Claudia, Hernández-Durán, Melissa, García-Contreras, Rodolfo, Maeda, Toshinari, Delgado, Gabriela, Morales-Espinosa, María del Rosario, Franco-Cendejas, Rafael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677329/
http://dx.doi.org/10.1093/ofid/ofad500.339
_version_ 1785150103928963072
author Fernández-Rodríguez, Diana
Carlos-Escalante, José Alberto
Esaú López-Jácome, Luis
Adriana Colin-Castro, Claudia
Hernández-Durán, Melissa
García-Contreras, Rodolfo
Maeda, Toshinari
Delgado, Gabriela
Morales-Espinosa, María del Rosario
Franco-Cendejas, Rafael
author_facet Fernández-Rodríguez, Diana
Carlos-Escalante, José Alberto
Esaú López-Jácome, Luis
Adriana Colin-Castro, Claudia
Hernández-Durán, Melissa
García-Contreras, Rodolfo
Maeda, Toshinari
Delgado, Gabriela
Morales-Espinosa, María del Rosario
Franco-Cendejas, Rafael
author_sort Fernández-Rodríguez, Diana
collection PubMed
description BACKGROUND: Prosthetic joint infection (PJI) is an infectious complication after total joint arthroplasty (TJA) with a high socioeconomic impact. Staphylococcus species attain for more than half of PJI cases. Biofilm formation and the development of small colony variants (SCV) have proven to enhance chronic and/or relapsing bacterial infections. In this regard, a better understanding of these factors can help overcome PJI and other device-associated infections. Thus, we aimed to analyze the clinical and microbiological differences between common/wild type (WT) and SCV Staphylococcus epidermidis strains METHODS: We analyzed a monomicrobial cohort of PJI patients affected by S. epidermidis. The bacterial isolates of patients with more than one-year of follow-up were examined for SCV detection. Then, we determined the genetic relatedness between strains with a pulsed field gel electrophoresis (PFGE). Finally, we selected 4 representative strains (2 WT and 2 SCV strains) to perform a differential expression analysis by RNA-seq. We performed a multiple test correction by controlling the false discovery rate (FDR) at 10%. RESULTS: S. epidermidis SCV affected 16 (37.6%) patients with monomicrobial PJI. The DNA fingerprints showed a high similarity, according to the Dice coefficient, between SCV strains and their WT counterparts. Nevertheless, further experiments demonstrated 22 genes with a significant differential expression profile: 12 were associated to metabolic pathways (carbon, amino acids, nucleotide, purines) and biosynthesis of secondary metabolites and cofactors, 3 with transmembrane transportation, 2 with redox balance, 1 with pH balance, 1 with integral components of the membrane and cell adhesion. Function was not identified for 3 of these genes. Differential gene expression profile among SCV isolates causing prosthetic joint infection. [Figure: see text] CONCLUSION: SCV are common in device-related infections like PJI. S. epidermidis SCV and their WT counterparts showed an extremely similar genetic background: still, SCV strains have a different gene expression profile. These findings explain some phenotypic variations (growth rate, biofilm properties, antimicrobial susceptibility profiles) found in clinical SCV strains. These genes may be promising therapeutic targets for combating chronic and/or relapsing bacterial infections. DISCLOSURES: All Authors: No reported disclosures
format Online
Article
Text
id pubmed-10677329
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-106773292023-11-27 267. Small colony variants causing Prosthetic joint infection depict a different gene expression profile Fernández-Rodríguez, Diana Carlos-Escalante, José Alberto Esaú López-Jácome, Luis Adriana Colin-Castro, Claudia Hernández-Durán, Melissa García-Contreras, Rodolfo Maeda, Toshinari Delgado, Gabriela Morales-Espinosa, María del Rosario Franco-Cendejas, Rafael Open Forum Infect Dis Abstract BACKGROUND: Prosthetic joint infection (PJI) is an infectious complication after total joint arthroplasty (TJA) with a high socioeconomic impact. Staphylococcus species attain for more than half of PJI cases. Biofilm formation and the development of small colony variants (SCV) have proven to enhance chronic and/or relapsing bacterial infections. In this regard, a better understanding of these factors can help overcome PJI and other device-associated infections. Thus, we aimed to analyze the clinical and microbiological differences between common/wild type (WT) and SCV Staphylococcus epidermidis strains METHODS: We analyzed a monomicrobial cohort of PJI patients affected by S. epidermidis. The bacterial isolates of patients with more than one-year of follow-up were examined for SCV detection. Then, we determined the genetic relatedness between strains with a pulsed field gel electrophoresis (PFGE). Finally, we selected 4 representative strains (2 WT and 2 SCV strains) to perform a differential expression analysis by RNA-seq. We performed a multiple test correction by controlling the false discovery rate (FDR) at 10%. RESULTS: S. epidermidis SCV affected 16 (37.6%) patients with monomicrobial PJI. The DNA fingerprints showed a high similarity, according to the Dice coefficient, between SCV strains and their WT counterparts. Nevertheless, further experiments demonstrated 22 genes with a significant differential expression profile: 12 were associated to metabolic pathways (carbon, amino acids, nucleotide, purines) and biosynthesis of secondary metabolites and cofactors, 3 with transmembrane transportation, 2 with redox balance, 1 with pH balance, 1 with integral components of the membrane and cell adhesion. Function was not identified for 3 of these genes. Differential gene expression profile among SCV isolates causing prosthetic joint infection. [Figure: see text] CONCLUSION: SCV are common in device-related infections like PJI. S. epidermidis SCV and their WT counterparts showed an extremely similar genetic background: still, SCV strains have a different gene expression profile. These findings explain some phenotypic variations (growth rate, biofilm properties, antimicrobial susceptibility profiles) found in clinical SCV strains. These genes may be promising therapeutic targets for combating chronic and/or relapsing bacterial infections. DISCLOSURES: All Authors: No reported disclosures Oxford University Press 2023-11-27 /pmc/articles/PMC10677329/ http://dx.doi.org/10.1093/ofid/ofad500.339 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstract
Fernández-Rodríguez, Diana
Carlos-Escalante, José Alberto
Esaú López-Jácome, Luis
Adriana Colin-Castro, Claudia
Hernández-Durán, Melissa
García-Contreras, Rodolfo
Maeda, Toshinari
Delgado, Gabriela
Morales-Espinosa, María del Rosario
Franco-Cendejas, Rafael
267. Small colony variants causing Prosthetic joint infection depict a different gene expression profile
title 267. Small colony variants causing Prosthetic joint infection depict a different gene expression profile
title_full 267. Small colony variants causing Prosthetic joint infection depict a different gene expression profile
title_fullStr 267. Small colony variants causing Prosthetic joint infection depict a different gene expression profile
title_full_unstemmed 267. Small colony variants causing Prosthetic joint infection depict a different gene expression profile
title_short 267. Small colony variants causing Prosthetic joint infection depict a different gene expression profile
title_sort 267. small colony variants causing prosthetic joint infection depict a different gene expression profile
topic Abstract
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677329/
http://dx.doi.org/10.1093/ofid/ofad500.339
work_keys_str_mv AT fernandezrodriguezdiana 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT carlosescalantejosealberto 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT esaulopezjacomeluis 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT adrianacolincastroclaudia 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT hernandezduranmelissa 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT garciacontrerasrodolfo 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT maedatoshinari 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT delgadogabriela 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT moralesespinosamariadelrosario 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile
AT francocendejasrafael 267smallcolonyvariantscausingprostheticjointinfectiondepictadifferentgeneexpressionprofile