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2635. Introduction of point-of-care testing for respiratory viruses in congregate living facilities

BACKGROUND: Timely diagnosis of viral respiratory infection is critical to control respiratory viral transmission in congregate care facilities. We conducted a quality improvement study to assess whether a point-of-care (POC) testing for detection of respiratory viruses could improve time to outbrea...

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Autores principales: Tan, Charlie, Ofner, Marianna, O’Brien, Jacyln, Chan, Christina, Kozak, Robert, Thomas, Neethu, Candon, Heather, Chan, Adrienne, Leis, Jerome A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677504/
http://dx.doi.org/10.1093/ofid/ofad500.2247
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author Tan, Charlie
Ofner, Marianna
O’Brien, Jacyln
Chan, Christina
Kozak, Robert
Thomas, Neethu
Candon, Heather
Chan, Adrienne
Leis, Jerome A
author_facet Tan, Charlie
Ofner, Marianna
O’Brien, Jacyln
Chan, Christina
Kozak, Robert
Thomas, Neethu
Candon, Heather
Chan, Adrienne
Leis, Jerome A
author_sort Tan, Charlie
collection PubMed
description BACKGROUND: Timely diagnosis of viral respiratory infection is critical to control respiratory viral transmission in congregate care facilities. We conducted a quality improvement study to assess whether a point-of-care (POC) testing for detection of respiratory viruses could improve time to outbreak measures in congregate living facilities. METHODS: We implemented a POC cartridge based nucleic acid amplification test platform, which detects SARS-CoV-2, influenza A, and respiratory syncytial virus, at one long-term care home and three retirement homes between December 1, 2022 and April 15, 2023. Residents with respiratory symptoms underwent paired testing, whereby nasopharyngeal swabs were tested first on POC, then on multiplex respiratory virus panel (MRVP) polymerase chain reaction at an external laboratory. We determined difference in turn-around time (TAT), as well as sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV), using MRVP as the reference standard. We also compared time to outbreak declaration (from MRVP result) to five other congregate care facilities without access to POC testing. RESULTS: A total of 189 tests were performed using POC testing, of which 39.7% (75/189) were positive. SARS-CoV-2 was the most common virus identified (90.7%, 68/75). Median difference in TAT between POC and MRVP was 34.0 hours (IQR 21.8–43.5 hours). Sensitivity, specificity, PPV and NPV of POC were 0.88, 0.87, 0.83 and 0.90, respectively. There were six outbreaks during the study period (all SARS-CoV-2), of which two were declared based on POC result alone, before MRVP was resulted. Median time to outbreak declaration from MRVP result for the remaining four outbreaks was 6.6 hours (IQR 4.6–9.2 hours). In comparison, there were nine outbreaks at the non-POC comparator facilities; median time to outbreak declaration was 15.2 hours (IQR 5.5–26.0 hours). CONCLUSION: We demonstrated the feasibility of implementing a POC platform in congregate living facilities for identification of respiratory viral infection. The improved TAT resulted in more expedited detection and declaration of outbreaks. DISCLOSURES: Jerome A. Leis, MD MSc FRCPC, Ontario Hospital Association, Ministry of Attorney General of Ontario, Seneca College: Expert Testimony
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spelling pubmed-106775042023-11-27 2635. Introduction of point-of-care testing for respiratory viruses in congregate living facilities Tan, Charlie Ofner, Marianna O’Brien, Jacyln Chan, Christina Kozak, Robert Thomas, Neethu Candon, Heather Chan, Adrienne Leis, Jerome A Open Forum Infect Dis Abstract BACKGROUND: Timely diagnosis of viral respiratory infection is critical to control respiratory viral transmission in congregate care facilities. We conducted a quality improvement study to assess whether a point-of-care (POC) testing for detection of respiratory viruses could improve time to outbreak measures in congregate living facilities. METHODS: We implemented a POC cartridge based nucleic acid amplification test platform, which detects SARS-CoV-2, influenza A, and respiratory syncytial virus, at one long-term care home and three retirement homes between December 1, 2022 and April 15, 2023. Residents with respiratory symptoms underwent paired testing, whereby nasopharyngeal swabs were tested first on POC, then on multiplex respiratory virus panel (MRVP) polymerase chain reaction at an external laboratory. We determined difference in turn-around time (TAT), as well as sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV), using MRVP as the reference standard. We also compared time to outbreak declaration (from MRVP result) to five other congregate care facilities without access to POC testing. RESULTS: A total of 189 tests were performed using POC testing, of which 39.7% (75/189) were positive. SARS-CoV-2 was the most common virus identified (90.7%, 68/75). Median difference in TAT between POC and MRVP was 34.0 hours (IQR 21.8–43.5 hours). Sensitivity, specificity, PPV and NPV of POC were 0.88, 0.87, 0.83 and 0.90, respectively. There were six outbreaks during the study period (all SARS-CoV-2), of which two were declared based on POC result alone, before MRVP was resulted. Median time to outbreak declaration from MRVP result for the remaining four outbreaks was 6.6 hours (IQR 4.6–9.2 hours). In comparison, there were nine outbreaks at the non-POC comparator facilities; median time to outbreak declaration was 15.2 hours (IQR 5.5–26.0 hours). CONCLUSION: We demonstrated the feasibility of implementing a POC platform in congregate living facilities for identification of respiratory viral infection. The improved TAT resulted in more expedited detection and declaration of outbreaks. DISCLOSURES: Jerome A. Leis, MD MSc FRCPC, Ontario Hospital Association, Ministry of Attorney General of Ontario, Seneca College: Expert Testimony Oxford University Press 2023-11-27 /pmc/articles/PMC10677504/ http://dx.doi.org/10.1093/ofid/ofad500.2247 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstract
Tan, Charlie
Ofner, Marianna
O’Brien, Jacyln
Chan, Christina
Kozak, Robert
Thomas, Neethu
Candon, Heather
Chan, Adrienne
Leis, Jerome A
2635. Introduction of point-of-care testing for respiratory viruses in congregate living facilities
title 2635. Introduction of point-of-care testing for respiratory viruses in congregate living facilities
title_full 2635. Introduction of point-of-care testing for respiratory viruses in congregate living facilities
title_fullStr 2635. Introduction of point-of-care testing for respiratory viruses in congregate living facilities
title_full_unstemmed 2635. Introduction of point-of-care testing for respiratory viruses in congregate living facilities
title_short 2635. Introduction of point-of-care testing for respiratory viruses in congregate living facilities
title_sort 2635. introduction of point-of-care testing for respiratory viruses in congregate living facilities
topic Abstract
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677504/
http://dx.doi.org/10.1093/ofid/ofad500.2247
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