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869. Evaluation of the Impact of Polymicrobial Bloodstream Infections (BSIs) on the Performance of BioFire Blood Culture Identification 2 (BCID2) Multiplex Polymerase Chain Reaction (PCR) Panel

BACKGROUND: Rapid diagnostic tests (RDTs) have led to a paradigm shift in the management of BSIs, allowing for earlier species identification and decreased time to appropriate antimicrobials. The University of Maryland Medical Center recently switched from Verigene, a nucleic acid microarray panel,...

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Autores principales: Lapin, Jonathan S, Gogineni, Aishwarya, Singh, Karan, Gao, Nina, Johnson, J Kristie, Claeys, Kimberly C
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677602/
http://dx.doi.org/10.1093/ofid/ofad500.914
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author Lapin, Jonathan S
Gogineni, Aishwarya
Singh, Karan
Gao, Nina
Johnson, J Kristie
Claeys, Kimberly C
author_facet Lapin, Jonathan S
Gogineni, Aishwarya
Singh, Karan
Gao, Nina
Johnson, J Kristie
Claeys, Kimberly C
author_sort Lapin, Jonathan S
collection PubMed
description BACKGROUND: Rapid diagnostic tests (RDTs) have led to a paradigm shift in the management of BSIs, allowing for earlier species identification and decreased time to appropriate antimicrobials. The University of Maryland Medical Center recently switched from Verigene, a nucleic acid microarray panel, to BioFire BCID2, a multiplex PCR panel. Whereas Verigene is known to perform poorly in polymicrobial BSIs, it is unknown how BioFire BCID2 performs and how this impacts downstream antimicrobial therapy decisions. METHODS: We performed a retrospective cohort study of adult patients with polymicrobial blood cultures tested with BioFire BCID2 between 01/01/2022 and 05/31/2022. Family, genus, species, and resistance identification from BioFire BCID2 were compared to conventional microbiological methods and phenotypic antimicrobial susceptibility testing (AST) to assess the on-panel accuracy of BCID2 in polymicrobial BSI. Antimicrobial prescribing based on BioFire BCID2 results was collected to determine how the BCID2 impacts decision making in polymicrobial BSIs. RESULTS: Among 504 patients with positive blood cultures, 52 (10.3%) were polymicrobial BSIs. Among these 52 BSIs, 91 distinct organisms were identified using BCID2, and 19 Enterobacterales, 33 Staphylococcus spp., and 14 Streptococcus spp. identified at the family or genus level. Additionally, 105 organisms and 19 Coagulase-negative Staphylococci were recovered with conventional methods. BCID2 correctly identified 89.4% (101/113) of on-panel organisms at the species level. There was 88.5% concordance between BCID2 resistance identification and phenotypic AST. 36 (69.2%) and 20 (38.5%) patients had antimicrobial regimen changes within 24 hours of BCID2 results and AST, respectively – most were de-escalations (66.7% and 85%, respectively). 12 of these patients had further changes in antimicrobials; 2 of which were escalations due to discrepant BCID2 and AST results. CONCLUSION: On-panel agreement between BioFire BCID2 and conventional methods was high in polymicrobial BSI, although less than reported in studies assessing only monomicrobial BSI. In patients with polymicrobial BSIs, the implementation of BCID2 allowed for early changes to antimicrobial therapy. DISCLOSURES: Kimberly C. Claeys, PharmD, Abbvie: Advisor/Consultant|bioMérieux Inc.: Advisor/Consultant|bioMérieux Inc.: Speaker|La Jolla Pharmaceuticals: Advisor/Consultant|Melinta Therapeutics: Advisor/Consultant
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spelling pubmed-106776022023-11-27 869. Evaluation of the Impact of Polymicrobial Bloodstream Infections (BSIs) on the Performance of BioFire Blood Culture Identification 2 (BCID2) Multiplex Polymerase Chain Reaction (PCR) Panel Lapin, Jonathan S Gogineni, Aishwarya Singh, Karan Gao, Nina Johnson, J Kristie Claeys, Kimberly C Open Forum Infect Dis Abstract BACKGROUND: Rapid diagnostic tests (RDTs) have led to a paradigm shift in the management of BSIs, allowing for earlier species identification and decreased time to appropriate antimicrobials. The University of Maryland Medical Center recently switched from Verigene, a nucleic acid microarray panel, to BioFire BCID2, a multiplex PCR panel. Whereas Verigene is known to perform poorly in polymicrobial BSIs, it is unknown how BioFire BCID2 performs and how this impacts downstream antimicrobial therapy decisions. METHODS: We performed a retrospective cohort study of adult patients with polymicrobial blood cultures tested with BioFire BCID2 between 01/01/2022 and 05/31/2022. Family, genus, species, and resistance identification from BioFire BCID2 were compared to conventional microbiological methods and phenotypic antimicrobial susceptibility testing (AST) to assess the on-panel accuracy of BCID2 in polymicrobial BSI. Antimicrobial prescribing based on BioFire BCID2 results was collected to determine how the BCID2 impacts decision making in polymicrobial BSIs. RESULTS: Among 504 patients with positive blood cultures, 52 (10.3%) were polymicrobial BSIs. Among these 52 BSIs, 91 distinct organisms were identified using BCID2, and 19 Enterobacterales, 33 Staphylococcus spp., and 14 Streptococcus spp. identified at the family or genus level. Additionally, 105 organisms and 19 Coagulase-negative Staphylococci were recovered with conventional methods. BCID2 correctly identified 89.4% (101/113) of on-panel organisms at the species level. There was 88.5% concordance between BCID2 resistance identification and phenotypic AST. 36 (69.2%) and 20 (38.5%) patients had antimicrobial regimen changes within 24 hours of BCID2 results and AST, respectively – most were de-escalations (66.7% and 85%, respectively). 12 of these patients had further changes in antimicrobials; 2 of which were escalations due to discrepant BCID2 and AST results. CONCLUSION: On-panel agreement between BioFire BCID2 and conventional methods was high in polymicrobial BSI, although less than reported in studies assessing only monomicrobial BSI. In patients with polymicrobial BSIs, the implementation of BCID2 allowed for early changes to antimicrobial therapy. DISCLOSURES: Kimberly C. Claeys, PharmD, Abbvie: Advisor/Consultant|bioMérieux Inc.: Advisor/Consultant|bioMérieux Inc.: Speaker|La Jolla Pharmaceuticals: Advisor/Consultant|Melinta Therapeutics: Advisor/Consultant Oxford University Press 2023-11-27 /pmc/articles/PMC10677602/ http://dx.doi.org/10.1093/ofid/ofad500.914 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstract
Lapin, Jonathan S
Gogineni, Aishwarya
Singh, Karan
Gao, Nina
Johnson, J Kristie
Claeys, Kimberly C
869. Evaluation of the Impact of Polymicrobial Bloodstream Infections (BSIs) on the Performance of BioFire Blood Culture Identification 2 (BCID2) Multiplex Polymerase Chain Reaction (PCR) Panel
title 869. Evaluation of the Impact of Polymicrobial Bloodstream Infections (BSIs) on the Performance of BioFire Blood Culture Identification 2 (BCID2) Multiplex Polymerase Chain Reaction (PCR) Panel
title_full 869. Evaluation of the Impact of Polymicrobial Bloodstream Infections (BSIs) on the Performance of BioFire Blood Culture Identification 2 (BCID2) Multiplex Polymerase Chain Reaction (PCR) Panel
title_fullStr 869. Evaluation of the Impact of Polymicrobial Bloodstream Infections (BSIs) on the Performance of BioFire Blood Culture Identification 2 (BCID2) Multiplex Polymerase Chain Reaction (PCR) Panel
title_full_unstemmed 869. Evaluation of the Impact of Polymicrobial Bloodstream Infections (BSIs) on the Performance of BioFire Blood Culture Identification 2 (BCID2) Multiplex Polymerase Chain Reaction (PCR) Panel
title_short 869. Evaluation of the Impact of Polymicrobial Bloodstream Infections (BSIs) on the Performance of BioFire Blood Culture Identification 2 (BCID2) Multiplex Polymerase Chain Reaction (PCR) Panel
title_sort 869. evaluation of the impact of polymicrobial bloodstream infections (bsis) on the performance of biofire blood culture identification 2 (bcid2) multiplex polymerase chain reaction (pcr) panel
topic Abstract
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677602/
http://dx.doi.org/10.1093/ofid/ofad500.914
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