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162. The Genotypic Antibiogram: Using Results of Gram-Negative Antimicrobial Resistance Genes Identified via Rapid Blood Culture Identification Tests to Optimize Treatment of Enterobacterales Bloodstream Infections

BACKGROUND: With the increasing incidence of infections from Enterobacterales resistant to commonly used antibiotics, rapid diagnostic tests, such as BioFire’s Blood Culture Identification 2 (BCID2) multiplex PCR panel, can be utilized to detect potential antimicrobial resistance more rapidly and he...

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Autores principales: Sunagawa, Shawnalyn, Tigh, Jeremy E, Okada, Ashlyn, Bergman, Scott J, Van Schooneveld, Trevor C, Chan, Yolande, Fey, Paul D, Ryder, Jonathan H
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677715/
http://dx.doi.org/10.1093/ofid/ofad500.235
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author Sunagawa, Shawnalyn
Tigh, Jeremy E
Okada, Ashlyn
Bergman, Scott J
Van Schooneveld, Trevor C
Chan, Yolande
Fey, Paul D
Ryder, Jonathan H
author_facet Sunagawa, Shawnalyn
Tigh, Jeremy E
Okada, Ashlyn
Bergman, Scott J
Van Schooneveld, Trevor C
Chan, Yolande
Fey, Paul D
Ryder, Jonathan H
author_sort Sunagawa, Shawnalyn
collection PubMed
description BACKGROUND: With the increasing incidence of infections from Enterobacterales resistant to commonly used antibiotics, rapid diagnostic tests, such as BioFire’s Blood Culture Identification 2 (BCID2) multiplex PCR panel, can be utilized to detect potential antimicrobial resistance more rapidly and help direct more appropriate empiric therapy. We describe the epidemiology of Enterobacterales bloodstream infection (BSI), associated antimicrobial resistance genes using BCID2, and subsequent susceptibility patterns at an academic medical center to develop a genotypic antibiogram. METHODS: We reviewed all positive BCID2 results at Nebraska Medical Center from 8/1/2021–11/1/2022. Only monomicrobial Enterobacterales BSI were included. Patient demographics, antimicrobial resistance markers, BCID2, culture, and susceptibility results were assessed. Sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) of bla(CTX-M) marker were compared to ceftriaxone susceptibility patterns. RESULTS: We reviewed 456 unique Enterobacterales isolates, of which 236 were from male patients (52%), 189 (41%) immunocompromised patients, and 342 (75%) community onset. The most common species identified were Escherichia coli (55%) and Klebsiella pneumoniae (17%). bla(CTX-M) was detected in 49 (11%) isolates, with 41 (84%) E. coli and 6 (12%) K. pneumoniae. bla(KPC) was detected in 2 isolates (1 K. oxytoca and 1 K. variicola), but no other carbapenemase genes were detected. bla(CTX-M) sensitivity and specificity for detection of ceftriaxone resistance was 83% and 100%, respectively. bla(CTX-M) PPV for ceftriaxone resistance was 100%, while the NPV of absent bla(CTX-M) for ceftriaxone susceptibility was 97%. CONCLUSION: Locally, the majority of ceftriaxone-resistant E. coli and Klebsiella BSIs harbor bla(CTX-M), while carbapenemases are rare. Utilization of rapid diagnostics can optimize antimicrobial therapy for Enterobacterales by creation of a genotypic antibiogram. DISCLOSURES: Scott J. Bergman, PharmD, bioMerieux, Inc.: Honoraria Trevor C. Van Schooneveld, MD, FSHEA, FACP, AN2 Therapeutics: Grant/Research Support|Biomeriuex: Advisor/Consultant|Biomeriuex: Grant/Research Support|Insmed: Grant/Research Support|Thermo-Fischer: Honoraria
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spelling pubmed-106777152023-11-27 162. The Genotypic Antibiogram: Using Results of Gram-Negative Antimicrobial Resistance Genes Identified via Rapid Blood Culture Identification Tests to Optimize Treatment of Enterobacterales Bloodstream Infections Sunagawa, Shawnalyn Tigh, Jeremy E Okada, Ashlyn Bergman, Scott J Van Schooneveld, Trevor C Chan, Yolande Fey, Paul D Ryder, Jonathan H Open Forum Infect Dis Abstract BACKGROUND: With the increasing incidence of infections from Enterobacterales resistant to commonly used antibiotics, rapid diagnostic tests, such as BioFire’s Blood Culture Identification 2 (BCID2) multiplex PCR panel, can be utilized to detect potential antimicrobial resistance more rapidly and help direct more appropriate empiric therapy. We describe the epidemiology of Enterobacterales bloodstream infection (BSI), associated antimicrobial resistance genes using BCID2, and subsequent susceptibility patterns at an academic medical center to develop a genotypic antibiogram. METHODS: We reviewed all positive BCID2 results at Nebraska Medical Center from 8/1/2021–11/1/2022. Only monomicrobial Enterobacterales BSI were included. Patient demographics, antimicrobial resistance markers, BCID2, culture, and susceptibility results were assessed. Sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) of bla(CTX-M) marker were compared to ceftriaxone susceptibility patterns. RESULTS: We reviewed 456 unique Enterobacterales isolates, of which 236 were from male patients (52%), 189 (41%) immunocompromised patients, and 342 (75%) community onset. The most common species identified were Escherichia coli (55%) and Klebsiella pneumoniae (17%). bla(CTX-M) was detected in 49 (11%) isolates, with 41 (84%) E. coli and 6 (12%) K. pneumoniae. bla(KPC) was detected in 2 isolates (1 K. oxytoca and 1 K. variicola), but no other carbapenemase genes were detected. bla(CTX-M) sensitivity and specificity for detection of ceftriaxone resistance was 83% and 100%, respectively. bla(CTX-M) PPV for ceftriaxone resistance was 100%, while the NPV of absent bla(CTX-M) for ceftriaxone susceptibility was 97%. CONCLUSION: Locally, the majority of ceftriaxone-resistant E. coli and Klebsiella BSIs harbor bla(CTX-M), while carbapenemases are rare. Utilization of rapid diagnostics can optimize antimicrobial therapy for Enterobacterales by creation of a genotypic antibiogram. DISCLOSURES: Scott J. Bergman, PharmD, bioMerieux, Inc.: Honoraria Trevor C. Van Schooneveld, MD, FSHEA, FACP, AN2 Therapeutics: Grant/Research Support|Biomeriuex: Advisor/Consultant|Biomeriuex: Grant/Research Support|Insmed: Grant/Research Support|Thermo-Fischer: Honoraria Oxford University Press 2023-11-27 /pmc/articles/PMC10677715/ http://dx.doi.org/10.1093/ofid/ofad500.235 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstract
Sunagawa, Shawnalyn
Tigh, Jeremy E
Okada, Ashlyn
Bergman, Scott J
Van Schooneveld, Trevor C
Chan, Yolande
Fey, Paul D
Ryder, Jonathan H
162. The Genotypic Antibiogram: Using Results of Gram-Negative Antimicrobial Resistance Genes Identified via Rapid Blood Culture Identification Tests to Optimize Treatment of Enterobacterales Bloodstream Infections
title 162. The Genotypic Antibiogram: Using Results of Gram-Negative Antimicrobial Resistance Genes Identified via Rapid Blood Culture Identification Tests to Optimize Treatment of Enterobacterales Bloodstream Infections
title_full 162. The Genotypic Antibiogram: Using Results of Gram-Negative Antimicrobial Resistance Genes Identified via Rapid Blood Culture Identification Tests to Optimize Treatment of Enterobacterales Bloodstream Infections
title_fullStr 162. The Genotypic Antibiogram: Using Results of Gram-Negative Antimicrobial Resistance Genes Identified via Rapid Blood Culture Identification Tests to Optimize Treatment of Enterobacterales Bloodstream Infections
title_full_unstemmed 162. The Genotypic Antibiogram: Using Results of Gram-Negative Antimicrobial Resistance Genes Identified via Rapid Blood Culture Identification Tests to Optimize Treatment of Enterobacterales Bloodstream Infections
title_short 162. The Genotypic Antibiogram: Using Results of Gram-Negative Antimicrobial Resistance Genes Identified via Rapid Blood Culture Identification Tests to Optimize Treatment of Enterobacterales Bloodstream Infections
title_sort 162. the genotypic antibiogram: using results of gram-negative antimicrobial resistance genes identified via rapid blood culture identification tests to optimize treatment of enterobacterales bloodstream infections
topic Abstract
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677715/
http://dx.doi.org/10.1093/ofid/ofad500.235
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