2476. Universal detection of healthcare-related bacterial transmissions using de novo assembly with short-read whole genome sequencing

BACKGROUND: Whole genome sequencing (WGS) is the gold standard for molecular evidence of pathogen transmission. To date, most WGS investigations within healthcare settings have used low cost short-read technologies (e.g., Illumina), aligning reads to a high quality reference genome. However, this re...

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Detalles Bibliográficos
Autores principales: Pak, Theodore R, Baker, Meghan, McSweeney, Rebecca, Sands, Kenneth E, Moody, Julia, Sljivo, Selsebil, Isaacs, Amanda, Septimus, Edward J, Coady, Micaela H, Poland, Russell, Blanchard, Eunice, Carver, Brandon, Smith, Kimberly N, McLean, Laura E, Guy, Jeffrey, Huang, Susan S, Grad, Yonatan H
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Abstract
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10677966/
http://dx.doi.org/10.1093/ofid/ofad500.2094

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