Cargando…

1326. Comparison of Positive BioFire® FilmArray® Meningitis Encephalitis (ME) Panels, CSF cultures, CSF Parameters and Inpatient Mortality Among Patients with Bacterial and Fungal Meningitis

BACKGROUND: The aim of this study was to evaluate the performance of the BioFire® FilmArray® Meningitis Encephalitis panel (MEP) for the detection of bacterial and fungal pathogens compared with cerebrospinal fluid (CSF) cultures and other parameters to determine the predicted value of a positive re...

Descripción completa

Detalles Bibliográficos
Autores principales: Myint, Thein, Castillo, Marice Ruiz Conejo, Soria, Jaime, Arora, Vaneet, Ribes, Julie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10678021/
http://dx.doi.org/10.1093/ofid/ofad500.1164
_version_ 1785150267136671744
author Myint, Thein
Castillo, Marice Ruiz Conejo
Soria, Jaime
Arora, Vaneet
Ribes, Julie
author_facet Myint, Thein
Castillo, Marice Ruiz Conejo
Soria, Jaime
Arora, Vaneet
Ribes, Julie
author_sort Myint, Thein
collection PubMed
description BACKGROUND: The aim of this study was to evaluate the performance of the BioFire® FilmArray® Meningitis Encephalitis panel (MEP) for the detection of bacterial and fungal pathogens compared with cerebrospinal fluid (CSF) cultures and other parameters to determine the predicted value of a positive result (PPV). METHODS: This study is a retrospective chart review of patients with positive MEP from 10/2016–9/2022 at the University of Kentucky. Results of the MEP, culture, cellularity, protein, and glucose were collected using an electronic medical record search. Chart review was performed to collect demographic data, presentation, and test indication if a bacteria or fungus was identified. MEP was considered true positive (TP) if it was confirmed by CSF culture. It was classified a likely TP based on a positive CSF Gram stain, blood culture, other CSF findings consistent with clinical meningitis. It was considered false positive (FP) if the MEP was discordant with CSF and clinical findings. Statistical analysis was performed. RESULTS: Of the 11,969 panels tested, 132 (1.1%) were positive for bacterial or fungal pathogens. Seventeen positive repeats were excluded. Clinical characteristics, outcomes, and CSF findings for 115 patients with positive MEP for bacterial and fungal organisms are shown in Table 1. Results were summarized as TP, likely TP or FP by the pathogen detected (Table 2). The majority of results [106(92.2%)] were classified as TP or likely TP whereas 9 (7.8%) were classified as FP. 28/37 (75.7%) of patients with negative CSF cultures received at least one day of antibiotics prior to lumbar puncture. One third of the FP results were S. agalactiae. FP were statistically different from those classified as positive for cellularity, glucose and protein (Table 3). [Figure: see text] [Figure: see text] CONCLUSION: The PPV of MEP ranged from 78.6-100% based on an organism. Three-quarters of negative CSF cultures were likely from a prior antibiotic exposure. FP MEP were most common for S. agalactiae. Interestingly, 27.4% (29/106) cases (excluding the FP) would not have had a pathogen definitively identified if MEP was not used. The positive CSF and blood culture rates were higher for cryptococcal meningitis. The median CSF cell count and protein were the highest among patients with S. pneumoniae meningitis. Inpatient mortality was uncommon. [Figure: see text] [Figure: see text] DISCLOSURES: All Authors: No reported disclosures
format Online
Article
Text
id pubmed-10678021
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-106780212023-11-27 1326. Comparison of Positive BioFire® FilmArray® Meningitis Encephalitis (ME) Panels, CSF cultures, CSF Parameters and Inpatient Mortality Among Patients with Bacterial and Fungal Meningitis Myint, Thein Castillo, Marice Ruiz Conejo Soria, Jaime Arora, Vaneet Ribes, Julie Open Forum Infect Dis Abstract BACKGROUND: The aim of this study was to evaluate the performance of the BioFire® FilmArray® Meningitis Encephalitis panel (MEP) for the detection of bacterial and fungal pathogens compared with cerebrospinal fluid (CSF) cultures and other parameters to determine the predicted value of a positive result (PPV). METHODS: This study is a retrospective chart review of patients with positive MEP from 10/2016–9/2022 at the University of Kentucky. Results of the MEP, culture, cellularity, protein, and glucose were collected using an electronic medical record search. Chart review was performed to collect demographic data, presentation, and test indication if a bacteria or fungus was identified. MEP was considered true positive (TP) if it was confirmed by CSF culture. It was classified a likely TP based on a positive CSF Gram stain, blood culture, other CSF findings consistent with clinical meningitis. It was considered false positive (FP) if the MEP was discordant with CSF and clinical findings. Statistical analysis was performed. RESULTS: Of the 11,969 panels tested, 132 (1.1%) were positive for bacterial or fungal pathogens. Seventeen positive repeats were excluded. Clinical characteristics, outcomes, and CSF findings for 115 patients with positive MEP for bacterial and fungal organisms are shown in Table 1. Results were summarized as TP, likely TP or FP by the pathogen detected (Table 2). The majority of results [106(92.2%)] were classified as TP or likely TP whereas 9 (7.8%) were classified as FP. 28/37 (75.7%) of patients with negative CSF cultures received at least one day of antibiotics prior to lumbar puncture. One third of the FP results were S. agalactiae. FP were statistically different from those classified as positive for cellularity, glucose and protein (Table 3). [Figure: see text] [Figure: see text] CONCLUSION: The PPV of MEP ranged from 78.6-100% based on an organism. Three-quarters of negative CSF cultures were likely from a prior antibiotic exposure. FP MEP were most common for S. agalactiae. Interestingly, 27.4% (29/106) cases (excluding the FP) would not have had a pathogen definitively identified if MEP was not used. The positive CSF and blood culture rates were higher for cryptococcal meningitis. The median CSF cell count and protein were the highest among patients with S. pneumoniae meningitis. Inpatient mortality was uncommon. [Figure: see text] [Figure: see text] DISCLOSURES: All Authors: No reported disclosures Oxford University Press 2023-11-27 /pmc/articles/PMC10678021/ http://dx.doi.org/10.1093/ofid/ofad500.1164 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstract
Myint, Thein
Castillo, Marice Ruiz Conejo
Soria, Jaime
Arora, Vaneet
Ribes, Julie
1326. Comparison of Positive BioFire® FilmArray® Meningitis Encephalitis (ME) Panels, CSF cultures, CSF Parameters and Inpatient Mortality Among Patients with Bacterial and Fungal Meningitis
title 1326. Comparison of Positive BioFire® FilmArray® Meningitis Encephalitis (ME) Panels, CSF cultures, CSF Parameters and Inpatient Mortality Among Patients with Bacterial and Fungal Meningitis
title_full 1326. Comparison of Positive BioFire® FilmArray® Meningitis Encephalitis (ME) Panels, CSF cultures, CSF Parameters and Inpatient Mortality Among Patients with Bacterial and Fungal Meningitis
title_fullStr 1326. Comparison of Positive BioFire® FilmArray® Meningitis Encephalitis (ME) Panels, CSF cultures, CSF Parameters and Inpatient Mortality Among Patients with Bacterial and Fungal Meningitis
title_full_unstemmed 1326. Comparison of Positive BioFire® FilmArray® Meningitis Encephalitis (ME) Panels, CSF cultures, CSF Parameters and Inpatient Mortality Among Patients with Bacterial and Fungal Meningitis
title_short 1326. Comparison of Positive BioFire® FilmArray® Meningitis Encephalitis (ME) Panels, CSF cultures, CSF Parameters and Inpatient Mortality Among Patients with Bacterial and Fungal Meningitis
title_sort 1326. comparison of positive biofire® filmarray® meningitis encephalitis (me) panels, csf cultures, csf parameters and inpatient mortality among patients with bacterial and fungal meningitis
topic Abstract
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10678021/
http://dx.doi.org/10.1093/ofid/ofad500.1164
work_keys_str_mv AT myintthein 1326comparisonofpositivebiofirefilmarraymeningitisencephalitismepanelscsfculturescsfparametersandinpatientmortalityamongpatientswithbacterialandfungalmeningitis
AT castillomariceruizconejo 1326comparisonofpositivebiofirefilmarraymeningitisencephalitismepanelscsfculturescsfparametersandinpatientmortalityamongpatientswithbacterialandfungalmeningitis
AT soriajaime 1326comparisonofpositivebiofirefilmarraymeningitisencephalitismepanelscsfculturescsfparametersandinpatientmortalityamongpatientswithbacterialandfungalmeningitis
AT aroravaneet 1326comparisonofpositivebiofirefilmarraymeningitisencephalitismepanelscsfculturescsfparametersandinpatientmortalityamongpatientswithbacterialandfungalmeningitis
AT ribesjulie 1326comparisonofpositivebiofirefilmarraymeningitisencephalitismepanelscsfculturescsfparametersandinpatientmortalityamongpatientswithbacterialandfungalmeningitis