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664. Diagnostic Performance of a Multiplexed Gastrointestinal PCR Panel on Identifying Diarrheal Pathogens in Children Undergoing Hematopoietic Stem Cell Transplant

BACKGROUND: Diarrhea is a common complication of hematopoietic stem cell transplantation (HSCT) and associated with substantial morbidity, but the etiology is often not identified. The objectives of this study were to evaluate 1) whether the introduce of FilmArray GI panel would increase diagnostic...

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Autores principales: Tao, Yue, Mo, Xi, Chen, Jing, XIA, Yijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10678518/
http://dx.doi.org/10.1093/ofid/ofad500.727
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author Tao, Yue
Mo, Xi
Chen, Jing
XIA, Yijun
author_facet Tao, Yue
Mo, Xi
Chen, Jing
XIA, Yijun
author_sort Tao, Yue
collection PubMed
description BACKGROUND: Diarrhea is a common complication of hematopoietic stem cell transplantation (HSCT) and associated with substantial morbidity, but the etiology is often not identified. The objectives of this study were to evaluate 1) whether the introduce of FilmArray GI panel would increase diagnostic yield, 2) the degree to which pre-transplantation colonization predicts post-transplantation infection. METHODS: From November 2019 and February 2021, a total of 158 patients undergoing HSCT were prospectively included in the study (Figue 1). Stool specimens were obtained from all HSCT recipients prior to conditioning therapy, on 28 ± 7 days after transplantation and at any new episode of diarrhea. All stool samples were tested by FilmArray GI panel, and other clinical microbiological assays were also performed as requested by the treating physician. [Figure: see text] Flowchart of patients’ recruitment. A total of 158 patients were recruited from 175 patients undergoing HSCT during the study period. Eighty-four of the 158 patients underwent diarrhea episodes after transplantation, while the other 74 patients did not. RESULTS: Eighty-four (53.16%) of the 158 patients developed diarrhea after transplantation. The primary cause of post-transplantation diarrhea was infection (57/84, 67.86%), followed by medication (38/84, 45.24%) and graft-versus-host disease (GVHD, 21/84, 25.00%) (Figure 2). Ninety-five (60.13%) of 158 patients were colonized with at least one gastrointestinal pathogen before conditioning therapy, and the most common colonized pathogens detected were C. difficile (62/95, 65.26%), EPEC (21/95, 22.11%), and norovirus (19/95, 20.00%) (Figue 3). The incidence of infectious diarrhea is significantly higher in colonized patients (47/95, 49.47%) than that in non-colonized patients (10/63, 15.87%) (p < 0.001) (Figure 4). Pre-transplantation colonization of norovirus was at the highest risk of developing post-transplantation diarrhea (14/19, 73.68%). [Figure: see text] Etiologies of diarrhea after transplantation. (A) Etiologies of diarrhea in 84 patients who underwent diarrhea episodes after transplantation; (B) Etiologies of diarrhea that combined all factors, including infection, GVHD and medication; (C) The incidence of diarrhea and infectious diarrhea in colonized and non-colonized patients. [Figure: see text] Pathogens detected by FilmArray GI panel in pre- and post- transplantation stool samples. The number of patients who had a clinical relevant post-transplantation diarrheal infection due to pre-transplantation colonization is shown for each pathogen (red part in bar plot). [Figure: see text] Impact of different underlying diseases on pathogen colonization and subsequent development of infectious diarrhea due to the colonized pathogens. (A) The number and proportions of patients with different underlying diseases who were colonized with gastrointestinal pathogens pre-transplantation. (B) The number and proportions of patients in the colonized group who developed infectious diarrhea due to their colonized pathogens. HM: Hematological malignancies; PI: Primary immunodeficiency; AA: Aplastic anemia; IMD: Inherited metabolic disorders. CONCLUSION: FilmArray GI panel can increase the detection rate of diarrheal pathogens in pediatric HSCT patients, and further studies assessing its clinical impact and cost-effectiveness are needed. DISCLOSURES: All Authors: No reported disclosures
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spelling pubmed-106785182023-11-27 664. Diagnostic Performance of a Multiplexed Gastrointestinal PCR Panel on Identifying Diarrheal Pathogens in Children Undergoing Hematopoietic Stem Cell Transplant Tao, Yue Mo, Xi Chen, Jing XIA, Yijun Open Forum Infect Dis Abstract BACKGROUND: Diarrhea is a common complication of hematopoietic stem cell transplantation (HSCT) and associated with substantial morbidity, but the etiology is often not identified. The objectives of this study were to evaluate 1) whether the introduce of FilmArray GI panel would increase diagnostic yield, 2) the degree to which pre-transplantation colonization predicts post-transplantation infection. METHODS: From November 2019 and February 2021, a total of 158 patients undergoing HSCT were prospectively included in the study (Figue 1). Stool specimens were obtained from all HSCT recipients prior to conditioning therapy, on 28 ± 7 days after transplantation and at any new episode of diarrhea. All stool samples were tested by FilmArray GI panel, and other clinical microbiological assays were also performed as requested by the treating physician. [Figure: see text] Flowchart of patients’ recruitment. A total of 158 patients were recruited from 175 patients undergoing HSCT during the study period. Eighty-four of the 158 patients underwent diarrhea episodes after transplantation, while the other 74 patients did not. RESULTS: Eighty-four (53.16%) of the 158 patients developed diarrhea after transplantation. The primary cause of post-transplantation diarrhea was infection (57/84, 67.86%), followed by medication (38/84, 45.24%) and graft-versus-host disease (GVHD, 21/84, 25.00%) (Figure 2). Ninety-five (60.13%) of 158 patients were colonized with at least one gastrointestinal pathogen before conditioning therapy, and the most common colonized pathogens detected were C. difficile (62/95, 65.26%), EPEC (21/95, 22.11%), and norovirus (19/95, 20.00%) (Figue 3). The incidence of infectious diarrhea is significantly higher in colonized patients (47/95, 49.47%) than that in non-colonized patients (10/63, 15.87%) (p < 0.001) (Figure 4). Pre-transplantation colonization of norovirus was at the highest risk of developing post-transplantation diarrhea (14/19, 73.68%). [Figure: see text] Etiologies of diarrhea after transplantation. (A) Etiologies of diarrhea in 84 patients who underwent diarrhea episodes after transplantation; (B) Etiologies of diarrhea that combined all factors, including infection, GVHD and medication; (C) The incidence of diarrhea and infectious diarrhea in colonized and non-colonized patients. [Figure: see text] Pathogens detected by FilmArray GI panel in pre- and post- transplantation stool samples. The number of patients who had a clinical relevant post-transplantation diarrheal infection due to pre-transplantation colonization is shown for each pathogen (red part in bar plot). [Figure: see text] Impact of different underlying diseases on pathogen colonization and subsequent development of infectious diarrhea due to the colonized pathogens. (A) The number and proportions of patients with different underlying diseases who were colonized with gastrointestinal pathogens pre-transplantation. (B) The number and proportions of patients in the colonized group who developed infectious diarrhea due to their colonized pathogens. HM: Hematological malignancies; PI: Primary immunodeficiency; AA: Aplastic anemia; IMD: Inherited metabolic disorders. CONCLUSION: FilmArray GI panel can increase the detection rate of diarrheal pathogens in pediatric HSCT patients, and further studies assessing its clinical impact and cost-effectiveness are needed. DISCLOSURES: All Authors: No reported disclosures Oxford University Press 2023-11-27 /pmc/articles/PMC10678518/ http://dx.doi.org/10.1093/ofid/ofad500.727 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstract
Tao, Yue
Mo, Xi
Chen, Jing
XIA, Yijun
664. Diagnostic Performance of a Multiplexed Gastrointestinal PCR Panel on Identifying Diarrheal Pathogens in Children Undergoing Hematopoietic Stem Cell Transplant
title 664. Diagnostic Performance of a Multiplexed Gastrointestinal PCR Panel on Identifying Diarrheal Pathogens in Children Undergoing Hematopoietic Stem Cell Transplant
title_full 664. Diagnostic Performance of a Multiplexed Gastrointestinal PCR Panel on Identifying Diarrheal Pathogens in Children Undergoing Hematopoietic Stem Cell Transplant
title_fullStr 664. Diagnostic Performance of a Multiplexed Gastrointestinal PCR Panel on Identifying Diarrheal Pathogens in Children Undergoing Hematopoietic Stem Cell Transplant
title_full_unstemmed 664. Diagnostic Performance of a Multiplexed Gastrointestinal PCR Panel on Identifying Diarrheal Pathogens in Children Undergoing Hematopoietic Stem Cell Transplant
title_short 664. Diagnostic Performance of a Multiplexed Gastrointestinal PCR Panel on Identifying Diarrheal Pathogens in Children Undergoing Hematopoietic Stem Cell Transplant
title_sort 664. diagnostic performance of a multiplexed gastrointestinal pcr panel on identifying diarrheal pathogens in children undergoing hematopoietic stem cell transplant
topic Abstract
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10678518/
http://dx.doi.org/10.1093/ofid/ofad500.727
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