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Application of machine learning models to identify serological predictors of COVID-19 severity and outcomes

Critically ill people with COVID-19 have greater antibody titers than those with mild to moderate illness, but their association with recovery or death from COVID-19 has not been characterized. In 178 COVID-19 patients, 73 non-hospitalized and 105 hospitalized patients, mucosal swabs and plasma samp...

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Autores principales: Klein, Sabra, Dhakal, Santosh, Yin, Anna, Escarra-Senmarti, Marta, Demko, Zoe, Pisanic, Nora, Johnston, Trevor, Trejo-Zambrano, Maria, Kruczynski, Kate, Lee, John, Hardick, Justin, Shea, Patrick, Shapiro, Janna, Park, Han-Sol, Parish, Maclaine, Caputo, Christopher, Ganesan, Abhinaya, Mullapudi, Sarika, Gould, Stephen, Betenbaugh, Michael, Pekosz, Andrew, Heaney, Christopher D, Antar, Annukka, Manabe, Yukari, Cox, Andrea, Karaba, Andrew, Andrade, Felipe, Zeger, Scott
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Journal Experts 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10680931/
https://www.ncbi.nlm.nih.gov/pubmed/38014049
http://dx.doi.org/10.21203/rs.3.rs-3463155/v1
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author Klein, Sabra
Dhakal, Santosh
Yin, Anna
Escarra-Senmarti, Marta
Demko, Zoe
Pisanic, Nora
Johnston, Trevor
Trejo-Zambrano, Maria
Kruczynski, Kate
Lee, John
Hardick, Justin
Shea, Patrick
Shapiro, Janna
Park, Han-Sol
Parish, Maclaine
Caputo, Christopher
Ganesan, Abhinaya
Mullapudi, Sarika
Gould, Stephen
Betenbaugh, Michael
Pekosz, Andrew
Heaney, Christopher D
Antar, Annukka
Manabe, Yukari
Cox, Andrea
Karaba, Andrew
Andrade, Felipe
Zeger, Scott
author_facet Klein, Sabra
Dhakal, Santosh
Yin, Anna
Escarra-Senmarti, Marta
Demko, Zoe
Pisanic, Nora
Johnston, Trevor
Trejo-Zambrano, Maria
Kruczynski, Kate
Lee, John
Hardick, Justin
Shea, Patrick
Shapiro, Janna
Park, Han-Sol
Parish, Maclaine
Caputo, Christopher
Ganesan, Abhinaya
Mullapudi, Sarika
Gould, Stephen
Betenbaugh, Michael
Pekosz, Andrew
Heaney, Christopher D
Antar, Annukka
Manabe, Yukari
Cox, Andrea
Karaba, Andrew
Andrade, Felipe
Zeger, Scott
author_sort Klein, Sabra
collection PubMed
description Critically ill people with COVID-19 have greater antibody titers than those with mild to moderate illness, but their association with recovery or death from COVID-19 has not been characterized. In 178 COVID-19 patients, 73 non-hospitalized and 105 hospitalized patients, mucosal swabs and plasma samples were collected at hospital enrollment and up to 3 months post-enrollment (MPE) to measure virus RNA, cytokines/chemokines, binding antibodies, ACE2 binding inhibition, and Fc effector antibody responses against SARS-CoV-2. The association of demographic variables and >20 serological antibody measures with intubation or death due to COVID-19 was determined using machine learning algorithms. Predictive models revealed that IgG binding and ACE2 binding inhibition responses at 1 MPE were positively and C1q complement activity at enrollment was negatively associated with an increased probability of intubation or death from COVID-19 within 3 MPE. Serological antibody measures were more predictive than demographic variables of intubation or death among COVID-19 patients.
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spelling pubmed-106809312023-11-27 Application of machine learning models to identify serological predictors of COVID-19 severity and outcomes Klein, Sabra Dhakal, Santosh Yin, Anna Escarra-Senmarti, Marta Demko, Zoe Pisanic, Nora Johnston, Trevor Trejo-Zambrano, Maria Kruczynski, Kate Lee, John Hardick, Justin Shea, Patrick Shapiro, Janna Park, Han-Sol Parish, Maclaine Caputo, Christopher Ganesan, Abhinaya Mullapudi, Sarika Gould, Stephen Betenbaugh, Michael Pekosz, Andrew Heaney, Christopher D Antar, Annukka Manabe, Yukari Cox, Andrea Karaba, Andrew Andrade, Felipe Zeger, Scott Res Sq Article Critically ill people with COVID-19 have greater antibody titers than those with mild to moderate illness, but their association with recovery or death from COVID-19 has not been characterized. In 178 COVID-19 patients, 73 non-hospitalized and 105 hospitalized patients, mucosal swabs and plasma samples were collected at hospital enrollment and up to 3 months post-enrollment (MPE) to measure virus RNA, cytokines/chemokines, binding antibodies, ACE2 binding inhibition, and Fc effector antibody responses against SARS-CoV-2. The association of demographic variables and >20 serological antibody measures with intubation or death due to COVID-19 was determined using machine learning algorithms. Predictive models revealed that IgG binding and ACE2 binding inhibition responses at 1 MPE were positively and C1q complement activity at enrollment was negatively associated with an increased probability of intubation or death from COVID-19 within 3 MPE. Serological antibody measures were more predictive than demographic variables of intubation or death among COVID-19 patients. American Journal Experts 2023-11-13 /pmc/articles/PMC10680931/ /pubmed/38014049 http://dx.doi.org/10.21203/rs.3.rs-3463155/v1 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Klein, Sabra
Dhakal, Santosh
Yin, Anna
Escarra-Senmarti, Marta
Demko, Zoe
Pisanic, Nora
Johnston, Trevor
Trejo-Zambrano, Maria
Kruczynski, Kate
Lee, John
Hardick, Justin
Shea, Patrick
Shapiro, Janna
Park, Han-Sol
Parish, Maclaine
Caputo, Christopher
Ganesan, Abhinaya
Mullapudi, Sarika
Gould, Stephen
Betenbaugh, Michael
Pekosz, Andrew
Heaney, Christopher D
Antar, Annukka
Manabe, Yukari
Cox, Andrea
Karaba, Andrew
Andrade, Felipe
Zeger, Scott
Application of machine learning models to identify serological predictors of COVID-19 severity and outcomes
title Application of machine learning models to identify serological predictors of COVID-19 severity and outcomes
title_full Application of machine learning models to identify serological predictors of COVID-19 severity and outcomes
title_fullStr Application of machine learning models to identify serological predictors of COVID-19 severity and outcomes
title_full_unstemmed Application of machine learning models to identify serological predictors of COVID-19 severity and outcomes
title_short Application of machine learning models to identify serological predictors of COVID-19 severity and outcomes
title_sort application of machine learning models to identify serological predictors of covid-19 severity and outcomes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10680931/
https://www.ncbi.nlm.nih.gov/pubmed/38014049
http://dx.doi.org/10.21203/rs.3.rs-3463155/v1
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