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MYLK and CALD1 as molecular targets in bladder cancer

Bladder cancer (BC) is a malignant tumor that occurs in bladder mucosa. However, relationship between myosin light chain kinase (MYLK) and CALD1 and BC remains unclear. The BC datasets GSE65635 and GSE100926 were downloaded from gene expression omnibus by GPL14951 and GPL14550. Multiple datasets wer...

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Autores principales: Jin, Hui, Liu, Bin, Guo, Xin, Qiao, Xi, Jiao, Wenpeng, Yang, Liman, Song, Xiaosen, Wei, Yueyue, Jin, Tingting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10681608/
https://www.ncbi.nlm.nih.gov/pubmed/38013282
http://dx.doi.org/10.1097/MD.0000000000036302
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author Jin, Hui
Liu, Bin
Guo, Xin
Qiao, Xi
Jiao, Wenpeng
Yang, Liman
Song, Xiaosen
Wei, Yueyue
Jin, Tingting
author_facet Jin, Hui
Liu, Bin
Guo, Xin
Qiao, Xi
Jiao, Wenpeng
Yang, Liman
Song, Xiaosen
Wei, Yueyue
Jin, Tingting
author_sort Jin, Hui
collection PubMed
description Bladder cancer (BC) is a malignant tumor that occurs in bladder mucosa. However, relationship between myosin light chain kinase (MYLK) and CALD1 and BC remains unclear. The BC datasets GSE65635 and GSE100926 were downloaded from gene expression omnibus by GPL14951 and GPL14550. Multiple datasets were merged and batched. Differentially expressed genes (DEGs) were screened and weighted gene co-expression network analysis was performed. gene ontology (GO) and Kyoto Encyclopedia of Gene and Genome analysis, gene set enrichment analysis, immune infiltration analysis, survival analysis and Comparative Toxicogenomics Database were performed. TargetScan screened miRNAs that regulated central DEGs. 1026 DEGs were identified. According to GO analysis, DEGs were mainly enriched in cancer pathway, cGMP-PKG signaling pathway, Apelin signaling pathway and proteoglycans in cancer. The enrichment items are similar to GO and Kyoto Encyclopedia of Gene and Genome enrichment projects for DEGs, which were mainly enriched in cancer pathways and leukocyte trans-endothelial cell migration. Among enrichment projects of metascape, GO has regulation of the enzyme-linked receptor protein signaling pathway and silk-based process, as well as an enrichment network stained by enrichment terms and P values. Nine core genes (ACTA2, MYLK, MYH11, MYL9, ACTG2, TPM1, TPM2, TAGLN and CALD1) were obtained, which were highly expressed in tumor tissue samples and lowly expressed in normal tissue samples. Nine genes were associated with necrosis, inflammation, tumor, edema, and ureteral obstruction. MYLK and CALD1 are highly expressed in the BC. The higher expression of MYLK and CALD1, the worse prognosis.
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spelling pubmed-106816082023-11-24 MYLK and CALD1 as molecular targets in bladder cancer Jin, Hui Liu, Bin Guo, Xin Qiao, Xi Jiao, Wenpeng Yang, Liman Song, Xiaosen Wei, Yueyue Jin, Tingting Medicine (Baltimore) 5700 Bladder cancer (BC) is a malignant tumor that occurs in bladder mucosa. However, relationship between myosin light chain kinase (MYLK) and CALD1 and BC remains unclear. The BC datasets GSE65635 and GSE100926 were downloaded from gene expression omnibus by GPL14951 and GPL14550. Multiple datasets were merged and batched. Differentially expressed genes (DEGs) were screened and weighted gene co-expression network analysis was performed. gene ontology (GO) and Kyoto Encyclopedia of Gene and Genome analysis, gene set enrichment analysis, immune infiltration analysis, survival analysis and Comparative Toxicogenomics Database were performed. TargetScan screened miRNAs that regulated central DEGs. 1026 DEGs were identified. According to GO analysis, DEGs were mainly enriched in cancer pathway, cGMP-PKG signaling pathway, Apelin signaling pathway and proteoglycans in cancer. The enrichment items are similar to GO and Kyoto Encyclopedia of Gene and Genome enrichment projects for DEGs, which were mainly enriched in cancer pathways and leukocyte trans-endothelial cell migration. Among enrichment projects of metascape, GO has regulation of the enzyme-linked receptor protein signaling pathway and silk-based process, as well as an enrichment network stained by enrichment terms and P values. Nine core genes (ACTA2, MYLK, MYH11, MYL9, ACTG2, TPM1, TPM2, TAGLN and CALD1) were obtained, which were highly expressed in tumor tissue samples and lowly expressed in normal tissue samples. Nine genes were associated with necrosis, inflammation, tumor, edema, and ureteral obstruction. MYLK and CALD1 are highly expressed in the BC. The higher expression of MYLK and CALD1, the worse prognosis. Lippincott Williams & Wilkins 2023-11-24 /pmc/articles/PMC10681608/ /pubmed/38013282 http://dx.doi.org/10.1097/MD.0000000000036302 Text en Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC) (https://creativecommons.org/licenses/by-nc/4.0/) , where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal.
spellingShingle 5700
Jin, Hui
Liu, Bin
Guo, Xin
Qiao, Xi
Jiao, Wenpeng
Yang, Liman
Song, Xiaosen
Wei, Yueyue
Jin, Tingting
MYLK and CALD1 as molecular targets in bladder cancer
title MYLK and CALD1 as molecular targets in bladder cancer
title_full MYLK and CALD1 as molecular targets in bladder cancer
title_fullStr MYLK and CALD1 as molecular targets in bladder cancer
title_full_unstemmed MYLK and CALD1 as molecular targets in bladder cancer
title_short MYLK and CALD1 as molecular targets in bladder cancer
title_sort mylk and cald1 as molecular targets in bladder cancer
topic 5700
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10681608/
https://www.ncbi.nlm.nih.gov/pubmed/38013282
http://dx.doi.org/10.1097/MD.0000000000036302
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