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Bayesian longitudinal tensor response regression for modeling neuroplasticity

A major interest in longitudinal neuroimaging studies involves investigating voxel‐level neuroplasticity due to treatment and other factors across visits. However, traditional voxel‐wise methods are beset with several pitfalls, which can compromise the accuracy of these approaches. We propose a nove...

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Autores principales: Kundu, Suprateek, Reinhardt, Alec, Song, Serena, Han, Joo, Meadows, M. Lawson, Crosson, Bruce, Krishnamurthy, Venkatagiri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10681668/
https://www.ncbi.nlm.nih.gov/pubmed/37909393
http://dx.doi.org/10.1002/hbm.26509
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author Kundu, Suprateek
Reinhardt, Alec
Song, Serena
Han, Joo
Meadows, M. Lawson
Crosson, Bruce
Krishnamurthy, Venkatagiri
author_facet Kundu, Suprateek
Reinhardt, Alec
Song, Serena
Han, Joo
Meadows, M. Lawson
Crosson, Bruce
Krishnamurthy, Venkatagiri
author_sort Kundu, Suprateek
collection PubMed
description A major interest in longitudinal neuroimaging studies involves investigating voxel‐level neuroplasticity due to treatment and other factors across visits. However, traditional voxel‐wise methods are beset with several pitfalls, which can compromise the accuracy of these approaches. We propose a novel Bayesian tensor response regression approach for longitudinal imaging data, which pools information across spatially distributed voxels to infer significant changes while adjusting for covariates. The proposed method, which is implemented using Markov chain Monte Carlo (MCMC) sampling, utilizes low‐rank decomposition to reduce dimensionality and preserve spatial configurations of voxels when estimating coefficients. It also enables feature selection via joint credible regions which respect the shape of the posterior distributions for more accurate inference. In addition to group level inferences, the method is able to infer individual‐level neuroplasticity, allowing for examination of personalized disease or recovery trajectories. The advantages of the proposed approach in terms of prediction and feature selection over voxel‐wise regression are highlighted via extensive simulation studies. Subsequently, we apply the approach to a longitudinal Aphasia dataset consisting of task functional MRI images from a group of subjects who were administered either a control intervention or intention treatment at baseline and were followed up over subsequent visits. Our analysis revealed that while the control therapy showed long‐term increases in brain activity, the intention treatment produced predominantly short‐term changes, both of which were concentrated in distinct localized regions. In contrast, the voxel‐wise regression failed to detect any significant neuroplasticity after multiplicity adjustments, which is biologically implausible and implies lack of power.
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spelling pubmed-106816682023-11-01 Bayesian longitudinal tensor response regression for modeling neuroplasticity Kundu, Suprateek Reinhardt, Alec Song, Serena Han, Joo Meadows, M. Lawson Crosson, Bruce Krishnamurthy, Venkatagiri Hum Brain Mapp Research Articles A major interest in longitudinal neuroimaging studies involves investigating voxel‐level neuroplasticity due to treatment and other factors across visits. However, traditional voxel‐wise methods are beset with several pitfalls, which can compromise the accuracy of these approaches. We propose a novel Bayesian tensor response regression approach for longitudinal imaging data, which pools information across spatially distributed voxels to infer significant changes while adjusting for covariates. The proposed method, which is implemented using Markov chain Monte Carlo (MCMC) sampling, utilizes low‐rank decomposition to reduce dimensionality and preserve spatial configurations of voxels when estimating coefficients. It also enables feature selection via joint credible regions which respect the shape of the posterior distributions for more accurate inference. In addition to group level inferences, the method is able to infer individual‐level neuroplasticity, allowing for examination of personalized disease or recovery trajectories. The advantages of the proposed approach in terms of prediction and feature selection over voxel‐wise regression are highlighted via extensive simulation studies. Subsequently, we apply the approach to a longitudinal Aphasia dataset consisting of task functional MRI images from a group of subjects who were administered either a control intervention or intention treatment at baseline and were followed up over subsequent visits. Our analysis revealed that while the control therapy showed long‐term increases in brain activity, the intention treatment produced predominantly short‐term changes, both of which were concentrated in distinct localized regions. In contrast, the voxel‐wise regression failed to detect any significant neuroplasticity after multiplicity adjustments, which is biologically implausible and implies lack of power. John Wiley & Sons, Inc. 2023-11-01 /pmc/articles/PMC10681668/ /pubmed/37909393 http://dx.doi.org/10.1002/hbm.26509 Text en © 2023 The Authors. Human Brain Mapping published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Kundu, Suprateek
Reinhardt, Alec
Song, Serena
Han, Joo
Meadows, M. Lawson
Crosson, Bruce
Krishnamurthy, Venkatagiri
Bayesian longitudinal tensor response regression for modeling neuroplasticity
title Bayesian longitudinal tensor response regression for modeling neuroplasticity
title_full Bayesian longitudinal tensor response regression for modeling neuroplasticity
title_fullStr Bayesian longitudinal tensor response regression for modeling neuroplasticity
title_full_unstemmed Bayesian longitudinal tensor response regression for modeling neuroplasticity
title_short Bayesian longitudinal tensor response regression for modeling neuroplasticity
title_sort bayesian longitudinal tensor response regression for modeling neuroplasticity
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10681668/
https://www.ncbi.nlm.nih.gov/pubmed/37909393
http://dx.doi.org/10.1002/hbm.26509
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