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Combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients

One important aim of precision oncology is a personalized treatment of patients. This can be achieved by various biomarkers, especially imaging parameters and gene expression signatures are commonly used. So far, combination approaches are sparse. The aim of the study was to independently validate t...

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Autores principales: Zschaeck, Sebastian, Klinger, Bertram, van den Hoff, Jörg, Cegla, Paulina, Apostolova, Ivayla, Kreissl, Michael C., Cholewiński, Witold, Kukuk, Emily, Strobel, Helen, Amthauer, Holger, Blüthgen, Nils, Zips, Daniel, Hofheinz, Frank
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10681996/
https://www.ncbi.nlm.nih.gov/pubmed/38012155
http://dx.doi.org/10.1038/s41598-023-46405-4
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author Zschaeck, Sebastian
Klinger, Bertram
van den Hoff, Jörg
Cegla, Paulina
Apostolova, Ivayla
Kreissl, Michael C.
Cholewiński, Witold
Kukuk, Emily
Strobel, Helen
Amthauer, Holger
Blüthgen, Nils
Zips, Daniel
Hofheinz, Frank
author_facet Zschaeck, Sebastian
Klinger, Bertram
van den Hoff, Jörg
Cegla, Paulina
Apostolova, Ivayla
Kreissl, Michael C.
Cholewiński, Witold
Kukuk, Emily
Strobel, Helen
Amthauer, Holger
Blüthgen, Nils
Zips, Daniel
Hofheinz, Frank
author_sort Zschaeck, Sebastian
collection PubMed
description One important aim of precision oncology is a personalized treatment of patients. This can be achieved by various biomarkers, especially imaging parameters and gene expression signatures are commonly used. So far, combination approaches are sparse. The aim of the study was to independently validate the prognostic value of the novel positron emission tomography (PET) parameter tumor asphericity (ASP) in non small cell lung cancer (NSCLC) patients and to investigate associations between published gene expression profiles and ASP. This was a retrospective evaluation of PET imaging and gene expression data from three public databases and two institutional datasets. The whole cohort comprised 253 NSCLC patients, all treated with curative intent surgery. Clinical parameters, standard PET parameters and ASP were evaluated in all patients. Additional gene expression data were available for 120 patients. Univariate Cox regression and Kaplan–Meier analysis was performed for the primary endpoint progression-free survival (PFS) and additional endpoints. Furthermore, multivariate cox regression testing was performed including clinically significant parameters, ASP, and the extracellular matrix-related prognostic gene signature (EPPI). In the whole cohort, a significant association with PFS was observed for ASP (p < 0.001) and EPPI (p = 0.012). Upon multivariate testing, EPPI remained significantly associated with PFS (p = 0.018) in the subgroup of patients with additional gene expression data, while ASP was significantly associated with PFS in the whole cohort (p = 0.012). In stage II patients, ASP was significantly associated with PFS (p = 0.009), and a previously published cutoff value for ASP (19.5%) was successfully validated (p = 0.008). In patients with additional gene expression data, EPPI showed a significant association with PFS, too (p = 0.033). The exploratory combination of ASP and EPPI showed that the combinatory approach has potential to further improve patient stratification compared to the use of only one parameter. We report the first successful validation of EPPI and ASP in stage II NSCLC patients. The combination of both parameters seems to be a very promising approach for improvement of risk stratification in a group of patients with urgent need for a more personalized treatment approach.
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spelling pubmed-106819962023-11-30 Combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients Zschaeck, Sebastian Klinger, Bertram van den Hoff, Jörg Cegla, Paulina Apostolova, Ivayla Kreissl, Michael C. Cholewiński, Witold Kukuk, Emily Strobel, Helen Amthauer, Holger Blüthgen, Nils Zips, Daniel Hofheinz, Frank Sci Rep Article One important aim of precision oncology is a personalized treatment of patients. This can be achieved by various biomarkers, especially imaging parameters and gene expression signatures are commonly used. So far, combination approaches are sparse. The aim of the study was to independently validate the prognostic value of the novel positron emission tomography (PET) parameter tumor asphericity (ASP) in non small cell lung cancer (NSCLC) patients and to investigate associations between published gene expression profiles and ASP. This was a retrospective evaluation of PET imaging and gene expression data from three public databases and two institutional datasets. The whole cohort comprised 253 NSCLC patients, all treated with curative intent surgery. Clinical parameters, standard PET parameters and ASP were evaluated in all patients. Additional gene expression data were available for 120 patients. Univariate Cox regression and Kaplan–Meier analysis was performed for the primary endpoint progression-free survival (PFS) and additional endpoints. Furthermore, multivariate cox regression testing was performed including clinically significant parameters, ASP, and the extracellular matrix-related prognostic gene signature (EPPI). In the whole cohort, a significant association with PFS was observed for ASP (p < 0.001) and EPPI (p = 0.012). Upon multivariate testing, EPPI remained significantly associated with PFS (p = 0.018) in the subgroup of patients with additional gene expression data, while ASP was significantly associated with PFS in the whole cohort (p = 0.012). In stage II patients, ASP was significantly associated with PFS (p = 0.009), and a previously published cutoff value for ASP (19.5%) was successfully validated (p = 0.008). In patients with additional gene expression data, EPPI showed a significant association with PFS, too (p = 0.033). The exploratory combination of ASP and EPPI showed that the combinatory approach has potential to further improve patient stratification compared to the use of only one parameter. We report the first successful validation of EPPI and ASP in stage II NSCLC patients. The combination of both parameters seems to be a very promising approach for improvement of risk stratification in a group of patients with urgent need for a more personalized treatment approach. Nature Publishing Group UK 2023-11-27 /pmc/articles/PMC10681996/ /pubmed/38012155 http://dx.doi.org/10.1038/s41598-023-46405-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Zschaeck, Sebastian
Klinger, Bertram
van den Hoff, Jörg
Cegla, Paulina
Apostolova, Ivayla
Kreissl, Michael C.
Cholewiński, Witold
Kukuk, Emily
Strobel, Helen
Amthauer, Holger
Blüthgen, Nils
Zips, Daniel
Hofheinz, Frank
Combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients
title Combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients
title_full Combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients
title_fullStr Combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients
title_full_unstemmed Combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients
title_short Combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients
title_sort combination of tumor asphericity and an extracellular matrix-related prognostic gene signature in non-small cell lung cancer patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10681996/
https://www.ncbi.nlm.nih.gov/pubmed/38012155
http://dx.doi.org/10.1038/s41598-023-46405-4
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