Cargando…

Sis2 regulates yeast replicative lifespan in a dose-dependent manner

Application of microfluidic platforms facilitated high-precision measurements of yeast replicative lifespan (RLS); however, comparative quantification of lifespan across strain libraries has been missing. Here we microfluidically measure the RLS of 307 yeast strains, each deleted for a single gene....

Descripción completa

Detalles Bibliográficos
Autores principales: Ölmez, Tolga T., Moreno, David F., Liu, Ping, Johnson, Zane M., McGinnis, Madeline M., Tu, Benjamin P., Hochstrasser, Mark, Acar, Murat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10682402/
https://www.ncbi.nlm.nih.gov/pubmed/38012152
http://dx.doi.org/10.1038/s41467-023-43233-y
_version_ 1785150967665131520
author Ölmez, Tolga T.
Moreno, David F.
Liu, Ping
Johnson, Zane M.
McGinnis, Madeline M.
Tu, Benjamin P.
Hochstrasser, Mark
Acar, Murat
author_facet Ölmez, Tolga T.
Moreno, David F.
Liu, Ping
Johnson, Zane M.
McGinnis, Madeline M.
Tu, Benjamin P.
Hochstrasser, Mark
Acar, Murat
author_sort Ölmez, Tolga T.
collection PubMed
description Application of microfluidic platforms facilitated high-precision measurements of yeast replicative lifespan (RLS); however, comparative quantification of lifespan across strain libraries has been missing. Here we microfluidically measure the RLS of 307 yeast strains, each deleted for a single gene. Despite previous reports of extended lifespan in these strains, we found that 56% of them did not actually live longer than the wild-type; while the remaining 44% showed extended lifespans, the degree of extension was often different from what was previously reported. Deletion of SIS2 gene led to the largest RLS increase observed. Sis2 regulated yeast lifespan in a dose-dependent manner, implying a role for the coenzyme A biosynthesis pathway in lifespan regulation. Introduction of the human PPCDC gene in the sis2Δ background neutralized the lifespan extension. RNA-seq experiments revealed transcriptional increases in cell-cycle machinery components in sis2Δ background. High-precision lifespan measurement will be essential to elucidate the gene network governing lifespan.
format Online
Article
Text
id pubmed-10682402
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-106824022023-11-30 Sis2 regulates yeast replicative lifespan in a dose-dependent manner Ölmez, Tolga T. Moreno, David F. Liu, Ping Johnson, Zane M. McGinnis, Madeline M. Tu, Benjamin P. Hochstrasser, Mark Acar, Murat Nat Commun Article Application of microfluidic platforms facilitated high-precision measurements of yeast replicative lifespan (RLS); however, comparative quantification of lifespan across strain libraries has been missing. Here we microfluidically measure the RLS of 307 yeast strains, each deleted for a single gene. Despite previous reports of extended lifespan in these strains, we found that 56% of them did not actually live longer than the wild-type; while the remaining 44% showed extended lifespans, the degree of extension was often different from what was previously reported. Deletion of SIS2 gene led to the largest RLS increase observed. Sis2 regulated yeast lifespan in a dose-dependent manner, implying a role for the coenzyme A biosynthesis pathway in lifespan regulation. Introduction of the human PPCDC gene in the sis2Δ background neutralized the lifespan extension. RNA-seq experiments revealed transcriptional increases in cell-cycle machinery components in sis2Δ background. High-precision lifespan measurement will be essential to elucidate the gene network governing lifespan. Nature Publishing Group UK 2023-11-27 /pmc/articles/PMC10682402/ /pubmed/38012152 http://dx.doi.org/10.1038/s41467-023-43233-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ölmez, Tolga T.
Moreno, David F.
Liu, Ping
Johnson, Zane M.
McGinnis, Madeline M.
Tu, Benjamin P.
Hochstrasser, Mark
Acar, Murat
Sis2 regulates yeast replicative lifespan in a dose-dependent manner
title Sis2 regulates yeast replicative lifespan in a dose-dependent manner
title_full Sis2 regulates yeast replicative lifespan in a dose-dependent manner
title_fullStr Sis2 regulates yeast replicative lifespan in a dose-dependent manner
title_full_unstemmed Sis2 regulates yeast replicative lifespan in a dose-dependent manner
title_short Sis2 regulates yeast replicative lifespan in a dose-dependent manner
title_sort sis2 regulates yeast replicative lifespan in a dose-dependent manner
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10682402/
https://www.ncbi.nlm.nih.gov/pubmed/38012152
http://dx.doi.org/10.1038/s41467-023-43233-y
work_keys_str_mv AT olmeztolgat sis2regulatesyeastreplicativelifespaninadosedependentmanner
AT morenodavidf sis2regulatesyeastreplicativelifespaninadosedependentmanner
AT liuping sis2regulatesyeastreplicativelifespaninadosedependentmanner
AT johnsonzanem sis2regulatesyeastreplicativelifespaninadosedependentmanner
AT mcginnismadelinem sis2regulatesyeastreplicativelifespaninadosedependentmanner
AT tubenjaminp sis2regulatesyeastreplicativelifespaninadosedependentmanner
AT hochstrassermark sis2regulatesyeastreplicativelifespaninadosedependentmanner
AT acarmurat sis2regulatesyeastreplicativelifespaninadosedependentmanner