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Mutations of RAS genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway

BACKGROUND: Acute myeloid leukemia (AML) is a malignant disease originating from myeloid hematopoietic stem cells. Recent studies have shown that certain gene mutations promote tumor cell survival and affect the prognosis of patients by affecting metabolic mechanisms in tumor cells. RAS gene mutatio...

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Autores principales: Liang, Tianqi, Kong, Yanxiang, Xue, Hongman, Wang, Wenqing, Li, Chunmou, Chen, Chun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10682766/
https://www.ncbi.nlm.nih.gov/pubmed/38033488
http://dx.doi.org/10.3389/fonc.2023.1280192
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author Liang, Tianqi
Kong, Yanxiang
Xue, Hongman
Wang, Wenqing
Li, Chunmou
Chen, Chun
author_facet Liang, Tianqi
Kong, Yanxiang
Xue, Hongman
Wang, Wenqing
Li, Chunmou
Chen, Chun
author_sort Liang, Tianqi
collection PubMed
description BACKGROUND: Acute myeloid leukemia (AML) is a malignant disease originating from myeloid hematopoietic stem cells. Recent studies have shown that certain gene mutations promote tumor cell survival and affect the prognosis of patients by affecting metabolic mechanisms in tumor cells. RAS gene mutations are prevalent in AML, and the RAS signaling pathway is closely related to many metabolic pathways. However, the effects of different RAS gene mutations on AML cell metabolism are unclear. OBJECTIVES: The main purpose of this study was to explore the effect of RAS gene mutation on the metabolic pathway of tumor cells. METHODS: In this study, we first used a retrovirus carrying a mutant gene to prepare Ba/F3 cell lines with RAS gene mutations, and then compared full-transcriptome data of Ba/F3 cells before and after RAS gene mutation and found that differentially expressed genes after NRAS(Q61K) and KRAS(G12V) mutation. RESULTS: We found a total of 1899 differentially expressed genes after NRAS(Q61K) and KRAS(G12V) mutation. 1089 of these genes were involved in metabolic processes, of which 167 genes were enriched in metabolism-related pathways. In metabolism-related pathways, differential genes were associated with the lipid metabolism pathway. Moreover, by comparing groups, we found that the expression of the DGKzeta and PLA2G4A genes in the glycerophospholipid metabolism pathway was significantly upregulated. CONCLUSION: In conclusion, our study revealed that RAS gene mutation is closely related to the glycerophospholipid metabolism pathway in Ba/F3 cells, which may contribute to new precision therapy strategies and the development and application of new therapeutic drugs for AML.
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spelling pubmed-106827662023-11-30 Mutations of RAS genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway Liang, Tianqi Kong, Yanxiang Xue, Hongman Wang, Wenqing Li, Chunmou Chen, Chun Front Oncol Oncology BACKGROUND: Acute myeloid leukemia (AML) is a malignant disease originating from myeloid hematopoietic stem cells. Recent studies have shown that certain gene mutations promote tumor cell survival and affect the prognosis of patients by affecting metabolic mechanisms in tumor cells. RAS gene mutations are prevalent in AML, and the RAS signaling pathway is closely related to many metabolic pathways. However, the effects of different RAS gene mutations on AML cell metabolism are unclear. OBJECTIVES: The main purpose of this study was to explore the effect of RAS gene mutation on the metabolic pathway of tumor cells. METHODS: In this study, we first used a retrovirus carrying a mutant gene to prepare Ba/F3 cell lines with RAS gene mutations, and then compared full-transcriptome data of Ba/F3 cells before and after RAS gene mutation and found that differentially expressed genes after NRAS(Q61K) and KRAS(G12V) mutation. RESULTS: We found a total of 1899 differentially expressed genes after NRAS(Q61K) and KRAS(G12V) mutation. 1089 of these genes were involved in metabolic processes, of which 167 genes were enriched in metabolism-related pathways. In metabolism-related pathways, differential genes were associated with the lipid metabolism pathway. Moreover, by comparing groups, we found that the expression of the DGKzeta and PLA2G4A genes in the glycerophospholipid metabolism pathway was significantly upregulated. CONCLUSION: In conclusion, our study revealed that RAS gene mutation is closely related to the glycerophospholipid metabolism pathway in Ba/F3 cells, which may contribute to new precision therapy strategies and the development and application of new therapeutic drugs for AML. Frontiers Media S.A. 2023-11-14 /pmc/articles/PMC10682766/ /pubmed/38033488 http://dx.doi.org/10.3389/fonc.2023.1280192 Text en Copyright © 2023 Liang, Kong, Xue, Wang, Li and Chen https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Liang, Tianqi
Kong, Yanxiang
Xue, Hongman
Wang, Wenqing
Li, Chunmou
Chen, Chun
Mutations of RAS genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway
title Mutations of RAS genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway
title_full Mutations of RAS genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway
title_fullStr Mutations of RAS genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway
title_full_unstemmed Mutations of RAS genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway
title_short Mutations of RAS genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway
title_sort mutations of ras genes identified in acute myeloid leukemia affect glycerophospholipid metabolism pathway
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10682766/
https://www.ncbi.nlm.nih.gov/pubmed/38033488
http://dx.doi.org/10.3389/fonc.2023.1280192
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