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Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds
OBJECTIVE: The data provided herein represent the whole-genome sequencing data associated with three sheep breeds of Iranian native breeds. Sheep are the first domesticated animals that, during the long path of the evolution process, have created gene variants with desirable phenotypic effects, so t...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10683258/ https://www.ncbi.nlm.nih.gov/pubmed/38012774 http://dx.doi.org/10.1186/s13104-023-06630-6 |
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author | Saadatabadi, Leila Mohammadipour Mohammadabadi, Mohammadreza Ghanatsaman, Zeinab Amiri Babenko, Olena Stavetska, Ruslana Volodymyrivna Kalashnik, Oleksandr Mikolayovich Afanasenko, Volodymyr Kochuk-Yashchenko, Oleksandr Anatoliiovych Kucher, Dmytro Mykolaiovych Nanaei, Hojjat Asadollahpour |
author_facet | Saadatabadi, Leila Mohammadipour Mohammadabadi, Mohammadreza Ghanatsaman, Zeinab Amiri Babenko, Olena Stavetska, Ruslana Volodymyrivna Kalashnik, Oleksandr Mikolayovich Afanasenko, Volodymyr Kochuk-Yashchenko, Oleksandr Anatoliiovych Kucher, Dmytro Mykolaiovych Nanaei, Hojjat Asadollahpour |
author_sort | Saadatabadi, Leila Mohammadipour |
collection | PubMed |
description | OBJECTIVE: The data provided herein represent the whole-genome sequencing data associated with three sheep breeds of Iranian native breeds. Sheep are the first domesticated animals that, during the long path of the evolution process, have created gene variants with desirable phenotypic effects, so they can be suitable models for biomedical research. In addition, sheep have a vital role in providing protein to a notable part of the human population around the world. DATA DESCRIPTION: Ten blood samples were taken from three Iranian native sheep breeds, the Zel, Karakul, and Kermani kinds. Blood samples genomes were extracted using the salting-out technique. The Illumina NovaSeq 6000 platform was used to carry out sequencing of the whole genome in a laboratory in China. All sequence information is available through the NCBI database in the sequence read archive (SRA) format under the accession number PRJNA904537. The dataset presented here can provide a useful resource for genome analysis of livestock breeds adapted to hot and dry regions. |
format | Online Article Text |
id | pubmed-10683258 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-106832582023-11-30 Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds Saadatabadi, Leila Mohammadipour Mohammadabadi, Mohammadreza Ghanatsaman, Zeinab Amiri Babenko, Olena Stavetska, Ruslana Volodymyrivna Kalashnik, Oleksandr Mikolayovich Afanasenko, Volodymyr Kochuk-Yashchenko, Oleksandr Anatoliiovych Kucher, Dmytro Mykolaiovych Nanaei, Hojjat Asadollahpour BMC Res Notes Data Note OBJECTIVE: The data provided herein represent the whole-genome sequencing data associated with three sheep breeds of Iranian native breeds. Sheep are the first domesticated animals that, during the long path of the evolution process, have created gene variants with desirable phenotypic effects, so they can be suitable models for biomedical research. In addition, sheep have a vital role in providing protein to a notable part of the human population around the world. DATA DESCRIPTION: Ten blood samples were taken from three Iranian native sheep breeds, the Zel, Karakul, and Kermani kinds. Blood samples genomes were extracted using the salting-out technique. The Illumina NovaSeq 6000 platform was used to carry out sequencing of the whole genome in a laboratory in China. All sequence information is available through the NCBI database in the sequence read archive (SRA) format under the accession number PRJNA904537. The dataset presented here can provide a useful resource for genome analysis of livestock breeds adapted to hot and dry regions. BioMed Central 2023-11-27 /pmc/articles/PMC10683258/ /pubmed/38012774 http://dx.doi.org/10.1186/s13104-023-06630-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Data Note Saadatabadi, Leila Mohammadipour Mohammadabadi, Mohammadreza Ghanatsaman, Zeinab Amiri Babenko, Olena Stavetska, Ruslana Volodymyrivna Kalashnik, Oleksandr Mikolayovich Afanasenko, Volodymyr Kochuk-Yashchenko, Oleksandr Anatoliiovych Kucher, Dmytro Mykolaiovych Nanaei, Hojjat Asadollahpour Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds |
title | Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds |
title_full | Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds |
title_fullStr | Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds |
title_full_unstemmed | Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds |
title_short | Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds |
title_sort | data of whole-genome sequencing of karakul, zel, and kermani sheep breeds |
topic | Data Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10683258/ https://www.ncbi.nlm.nih.gov/pubmed/38012774 http://dx.doi.org/10.1186/s13104-023-06630-6 |
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