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Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds

OBJECTIVE: The data provided herein represent the whole-genome sequencing data associated with three sheep breeds of Iranian native breeds. Sheep are the first domesticated animals that, during the long path of the evolution process, have created gene variants with desirable phenotypic effects, so t...

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Autores principales: Saadatabadi, Leila Mohammadipour, Mohammadabadi, Mohammadreza, Ghanatsaman, Zeinab Amiri, Babenko, Olena, Stavetska, Ruslana Volodymyrivna, Kalashnik, Oleksandr Mikolayovich, Afanasenko, Volodymyr, Kochuk-Yashchenko, Oleksandr Anatoliiovych, Kucher, Dmytro Mykolaiovych, Nanaei, Hojjat Asadollahpour
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10683258/
https://www.ncbi.nlm.nih.gov/pubmed/38012774
http://dx.doi.org/10.1186/s13104-023-06630-6
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author Saadatabadi, Leila Mohammadipour
Mohammadabadi, Mohammadreza
Ghanatsaman, Zeinab Amiri
Babenko, Olena
Stavetska, Ruslana Volodymyrivna
Kalashnik, Oleksandr Mikolayovich
Afanasenko, Volodymyr
Kochuk-Yashchenko, Oleksandr Anatoliiovych
Kucher, Dmytro Mykolaiovych
Nanaei, Hojjat Asadollahpour
author_facet Saadatabadi, Leila Mohammadipour
Mohammadabadi, Mohammadreza
Ghanatsaman, Zeinab Amiri
Babenko, Olena
Stavetska, Ruslana Volodymyrivna
Kalashnik, Oleksandr Mikolayovich
Afanasenko, Volodymyr
Kochuk-Yashchenko, Oleksandr Anatoliiovych
Kucher, Dmytro Mykolaiovych
Nanaei, Hojjat Asadollahpour
author_sort Saadatabadi, Leila Mohammadipour
collection PubMed
description OBJECTIVE: The data provided herein represent the whole-genome sequencing data associated with three sheep breeds of Iranian native breeds. Sheep are the first domesticated animals that, during the long path of the evolution process, have created gene variants with desirable phenotypic effects, so they can be suitable models for biomedical research. In addition, sheep have a vital role in providing protein to a notable part of the human population around the world. DATA DESCRIPTION: Ten blood samples were taken from three Iranian native sheep breeds, the Zel, Karakul, and Kermani kinds. Blood samples genomes were extracted using the salting-out technique. The Illumina NovaSeq 6000 platform was used to carry out sequencing of the whole genome in a laboratory in China. All sequence information is available through the NCBI database in the sequence read archive (SRA) format under the accession number PRJNA904537. The dataset presented here can provide a useful resource for genome analysis of livestock breeds adapted to hot and dry regions.
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spelling pubmed-106832582023-11-30 Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds Saadatabadi, Leila Mohammadipour Mohammadabadi, Mohammadreza Ghanatsaman, Zeinab Amiri Babenko, Olena Stavetska, Ruslana Volodymyrivna Kalashnik, Oleksandr Mikolayovich Afanasenko, Volodymyr Kochuk-Yashchenko, Oleksandr Anatoliiovych Kucher, Dmytro Mykolaiovych Nanaei, Hojjat Asadollahpour BMC Res Notes Data Note OBJECTIVE: The data provided herein represent the whole-genome sequencing data associated with three sheep breeds of Iranian native breeds. Sheep are the first domesticated animals that, during the long path of the evolution process, have created gene variants with desirable phenotypic effects, so they can be suitable models for biomedical research. In addition, sheep have a vital role in providing protein to a notable part of the human population around the world. DATA DESCRIPTION: Ten blood samples were taken from three Iranian native sheep breeds, the Zel, Karakul, and Kermani kinds. Blood samples genomes were extracted using the salting-out technique. The Illumina NovaSeq 6000 platform was used to carry out sequencing of the whole genome in a laboratory in China. All sequence information is available through the NCBI database in the sequence read archive (SRA) format under the accession number PRJNA904537. The dataset presented here can provide a useful resource for genome analysis of livestock breeds adapted to hot and dry regions. BioMed Central 2023-11-27 /pmc/articles/PMC10683258/ /pubmed/38012774 http://dx.doi.org/10.1186/s13104-023-06630-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Data Note
Saadatabadi, Leila Mohammadipour
Mohammadabadi, Mohammadreza
Ghanatsaman, Zeinab Amiri
Babenko, Olena
Stavetska, Ruslana Volodymyrivna
Kalashnik, Oleksandr Mikolayovich
Afanasenko, Volodymyr
Kochuk-Yashchenko, Oleksandr Anatoliiovych
Kucher, Dmytro Mykolaiovych
Nanaei, Hojjat Asadollahpour
Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds
title Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds
title_full Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds
title_fullStr Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds
title_full_unstemmed Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds
title_short Data of whole-genome sequencing of Karakul, Zel, and Kermani sheep breeds
title_sort data of whole-genome sequencing of karakul, zel, and kermani sheep breeds
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10683258/
https://www.ncbi.nlm.nih.gov/pubmed/38012774
http://dx.doi.org/10.1186/s13104-023-06630-6
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