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N7-methylguanosine-related miRNAs predict hepatocellular carcinoma prognosis and immune therapy
N7-methylguanosine (m(7)G) modification has been notably linked with the development of many tumors. However, no investigations have been conducted on whether m(7)G-related miRNA (m(7)G-miRNA) is a prognostic index of hepatocellular carcinoma (HCC). Therefore, this investigation aimed to establish a...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10683595/ https://www.ncbi.nlm.nih.gov/pubmed/37925170 http://dx.doi.org/10.18632/aging.205172 |
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author | Ma, Liping Ma, Qingwei Deng, Qiaomei Zhou, Jilu Zhou, Yingpei Wei, Qianqian Huang, Zhihu Lao, Xiaoxia Du, Ping |
author_facet | Ma, Liping Ma, Qingwei Deng, Qiaomei Zhou, Jilu Zhou, Yingpei Wei, Qianqian Huang, Zhihu Lao, Xiaoxia Du, Ping |
author_sort | Ma, Liping |
collection | PubMed |
description | N7-methylguanosine (m(7)G) modification has been notably linked with the development of many tumors. However, no investigations have been conducted on whether m(7)G-related miRNA (m(7)G-miRNA) is a prognostic index of hepatocellular carcinoma (HCC). Therefore, this investigation aimed to establish a predictive m(7)G-miRNA signature for efficient HCC prognosis and elucidate the associated immune cell infiltration (ICI) and functions in the tumor microenvironment. RNA sequencing and clinical data on 375 HCC and 50 healthy tissue samples were acquired from The Cancer Genome Atlas database. The m(7)G-miRNA regulators methyltransferase-like 1 and WD repeat domain 4 were acquired from the TargetScan database. Univariate Cox regression analysis was conducted on the 63 differentially expressed m(7)G-miRNAs identified. A prognostic signature that consisted of seven miRNAs was identified. According to their risk scores, individuals with HCC were divided into high-risk (HR) and low-risk (LR) cohorts. A Kaplan-Meier test revealed that survival in the HR HCC patients was poorer than in the LR cohort (p < 0.001). The area under the receiver operating characteristic curves of 1-, 3-, and 5-year overall survival were 0.706, 0.695, and 0.715, respectively. A nomogram of sex, risk score, age, and stage indicated the HCC patients’ overall survival. Furthermore, it was indicated that the HR and LR patients had different degrees of ICI and immune function. A pathway enrichment analysis revealed the association of several immunity-linked pathways with the risk model. In conclusion, the signature established has great prognostic value and could be used as a new immunotherapy target for individuals with HCC. |
format | Online Article Text |
id | pubmed-10683595 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-106835952023-11-30 N7-methylguanosine-related miRNAs predict hepatocellular carcinoma prognosis and immune therapy Ma, Liping Ma, Qingwei Deng, Qiaomei Zhou, Jilu Zhou, Yingpei Wei, Qianqian Huang, Zhihu Lao, Xiaoxia Du, Ping Aging (Albany NY) Research Paper N7-methylguanosine (m(7)G) modification has been notably linked with the development of many tumors. However, no investigations have been conducted on whether m(7)G-related miRNA (m(7)G-miRNA) is a prognostic index of hepatocellular carcinoma (HCC). Therefore, this investigation aimed to establish a predictive m(7)G-miRNA signature for efficient HCC prognosis and elucidate the associated immune cell infiltration (ICI) and functions in the tumor microenvironment. RNA sequencing and clinical data on 375 HCC and 50 healthy tissue samples were acquired from The Cancer Genome Atlas database. The m(7)G-miRNA regulators methyltransferase-like 1 and WD repeat domain 4 were acquired from the TargetScan database. Univariate Cox regression analysis was conducted on the 63 differentially expressed m(7)G-miRNAs identified. A prognostic signature that consisted of seven miRNAs was identified. According to their risk scores, individuals with HCC were divided into high-risk (HR) and low-risk (LR) cohorts. A Kaplan-Meier test revealed that survival in the HR HCC patients was poorer than in the LR cohort (p < 0.001). The area under the receiver operating characteristic curves of 1-, 3-, and 5-year overall survival were 0.706, 0.695, and 0.715, respectively. A nomogram of sex, risk score, age, and stage indicated the HCC patients’ overall survival. Furthermore, it was indicated that the HR and LR patients had different degrees of ICI and immune function. A pathway enrichment analysis revealed the association of several immunity-linked pathways with the risk model. In conclusion, the signature established has great prognostic value and could be used as a new immunotherapy target for individuals with HCC. Impact Journals 2023-11-03 /pmc/articles/PMC10683595/ /pubmed/37925170 http://dx.doi.org/10.18632/aging.205172 Text en Copyright: © 2023 Ma et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Ma, Liping Ma, Qingwei Deng, Qiaomei Zhou, Jilu Zhou, Yingpei Wei, Qianqian Huang, Zhihu Lao, Xiaoxia Du, Ping N7-methylguanosine-related miRNAs predict hepatocellular carcinoma prognosis and immune therapy |
title | N7-methylguanosine-related miRNAs predict hepatocellular carcinoma prognosis and immune therapy |
title_full | N7-methylguanosine-related miRNAs predict hepatocellular carcinoma prognosis and immune therapy |
title_fullStr | N7-methylguanosine-related miRNAs predict hepatocellular carcinoma prognosis and immune therapy |
title_full_unstemmed | N7-methylguanosine-related miRNAs predict hepatocellular carcinoma prognosis and immune therapy |
title_short | N7-methylguanosine-related miRNAs predict hepatocellular carcinoma prognosis and immune therapy |
title_sort | n7-methylguanosine-related mirnas predict hepatocellular carcinoma prognosis and immune therapy |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10683595/ https://www.ncbi.nlm.nih.gov/pubmed/37925170 http://dx.doi.org/10.18632/aging.205172 |
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